Click here to switch to the map view.

The map label for this gene is glgA

Identifier: 37520501

GI number: 37520501

Start: 987873

End: 989249

Strand: Direct

Name: glgA

Synonym: gvip125

Alternate gene names: 37520501

Gene position: 987873-989249 (Clockwise)

Preceding gene: 37520500

Following gene: 37520504

Centisome position: 21.2

GC content: 64.05

Gene sequence:

>1377_bases
GTGAAGGTATTGTTTGCGGCGGCGGAGTGTGCCCCCTTAGCCAAGGTGGGCGGCATGGCGGACGTGGTGGGCTCGTTGCC
CCTGGCCCTGGCCGAGATGGGGCTCGATGTACGGATCATCCTGCCCTACTACGGCTTTTTGGGGGAGCTGCCCAAGTCCG
AGCAGCCGGTCTGGACCGGCGGCGCCATGTTCCAGCAGGTCGAAATTTACGAAGCGCGCCTGCCCGGCAGCGACATCCCC
CTCTATCTGGTCGGTCACCCGGCCTTTGCCAACGAGCGCATCTACGGTTTTGAGGACGAAGCCTGGCGCTTCACGCTCTT
CTCGCGCACGGTGGCCGAATTTCTCTGGCGGGGCGGTTGGGATCCGCAGGTGCTCCACTGCCACGACTGGCACACGGGAC
TGTTGCCCCTCTGGATGCGGTCGATGCCGGTGATGACGGTCTTCACCATCCACAACCTCGCCTACCAGGGACCGCCCCTG
CCGTACTTTCGCGCCTTCGTGGACGTCCCCTACGACACGGGCGCCTGGAACCCGATGGTGGCGGGGATCATCCACAGCGA
CGCGATCACGGCGGTCTCGCCCACCTATGCGCGCGAAATTTGCACCCCCGAGTACGGCGAGCGCCTGGACGGCCTGCTCA
GGGGCCAGGGAAACCGCCTGACCGGTATCCTCAACGGCATCAACACCAAGGCCCTCGACCCGGCCACCGACAAGCACCTG
ACGGTCAACTACGACACGACCAGTCTCGATCGGCGCGTCGAGAACAAACTGGCCCTCCAGCGCGAGTTCGGCTTCGAGGT
CAGTGCCGATCGCTTGCTGGTGGGTATCGTCTCGCGGCTGGTGGACCAGAAGGGCTTCGATTTGCTCGCGCCGCTCTGGG
ACAACTGGATGCACACCAGCGGCGCCCAACTGGTCGTGCTCGGCAGCGGCGACCCGTTTTACGAATTTCTGTTTCGCTCG
GCGGCGGAGCGCTACCCGGACCGCATCAAGGCGGTGCTGAGCTACAACGTGCCCATCGCCCAGCGCATCTACGGCGGCGC
GGATCTGTTTTTGATGCCCTCGCGCTTCGAGCCCTGCGGCATCGGCCAGATGATTGCGCTGCGCTACGGGGCGGTGCCTT
TGGTGCGCAAGACCGGTGGCCTCGCCGACACGGTTTTCTTCCACAATCCGCTCGATGAAAAAGGCAACGGCTTTTTGTTC
GACCGCTACGACCCGGCCAACCTGCTTGCCATGCTCTACCGCGCCGAGGAAGCGTTTCGCTACAAAGACTACTGGCGACG
ACTGCAATTGCGCGGCATGGAAGCGGACCTCAGTTGGCGCGCCTCCGCCCATCAGTACGCGGATCTCTACAAGTCGCTGA
TTGCTCGCCTGGGCTAA

Upstream 100 bases:

>100_bases
CCTACCTGCTCTGGCGGGCCAACCAGTAACCGGTGGTGCCGAAGACTGGCGCTTGGGCCGCGAGGCGGGATAATCGTAAA
GAAGCATCACAAGGACGAGC

Downstream 100 bases:

>100_bases
CTACCCAGTCTTCACCGGCAACAGCGCCTCGGAGAGAGTGCGCAGCTGCGCGTCGGTGCCCAGGCAAAAAAGAATATCCC
CCTGGGCGAGGATGGTCTCG

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKVLFAAAECAPLAKVGGMADVVGSLPLALAEMGLDVRIILPYYGFLGELPKSEQPVWTGGAMFQQVEIYEARLPGSDIP
LYLVGHPAFANERIYGFEDEAWRFTLFSRTVAEFLWRGGWDPQVLHCHDWHTGLLPLWMRSMPVMTVFTIHNLAYQGPPL
PYFRAFVDVPYDTGAWNPMVAGIIHSDAITAVSPTYAREICTPEYGERLDGLLRGQGNRLTGILNGINTKALDPATDKHL
TVNYDTTSLDRRVENKLALQREFGFEVSADRLLVGIVSRLVDQKGFDLLAPLWDNWMHTSGAQLVVLGSGDPFYEFLFRS
AAERYPDRIKAVLSYNVPIAQRIYGGADLFLMPSRFEPCGIGQMIALRYGAVPLVRKTGGLADTVFFHNPLDEKGNGFLF
DRYDPANLLAMLYRAEEAFRYKDYWRRLQLRGMEADLSWRASAHQYADLYKSLIARLG

Sequences:

>Translated_458_residues
MKVLFAAAECAPLAKVGGMADVVGSLPLALAEMGLDVRIILPYYGFLGELPKSEQPVWTGGAMFQQVEIYEARLPGSDIP
LYLVGHPAFANERIYGFEDEAWRFTLFSRTVAEFLWRGGWDPQVLHCHDWHTGLLPLWMRSMPVMTVFTIHNLAYQGPPL
PYFRAFVDVPYDTGAWNPMVAGIIHSDAITAVSPTYAREICTPEYGERLDGLLRGQGNRLTGILNGINTKALDPATDKHL
TVNYDTTSLDRRVENKLALQREFGFEVSADRLLVGIVSRLVDQKGFDLLAPLWDNWMHTSGAQLVVLGSGDPFYEFLFRS
AAERYPDRIKAVLSYNVPIAQRIYGGADLFLMPSRFEPCGIGQMIALRYGAVPLVRKTGGLADTVFFHNPLDEKGNGFLF
DRYDPANLLAMLYRAEEAFRYKDYWRRLQLRGMEADLSWRASAHQYADLYKSLIARLG
>Mature_458_residues
MKVLFAAAECAPLAKVGGMADVVGSLPLALAEMGLDVRIILPYYGFLGELPKSEQPVWTGGAMFQQVEIYEARLPGSDIP
LYLVGHPAFANERIYGFEDEAWRFTLFSRTVAEFLWRGGWDPQVLHCHDWHTGLLPLWMRSMPVMTVFTIHNLAYQGPPL
PYFRAFVDVPYDTGAWNPMVAGIIHSDAITAVSPTYAREICTPEYGERLDGLLRGQGNRLTGILNGINTKALDPATDKHL
TVNYDTTSLDRRVENKLALQREFGFEVSADRLLVGIVSRLVDQKGFDLLAPLWDNWMHTSGAQLVVLGSGDPFYEFLFRS
AAERYPDRIKAVLSYNVPIAQRIYGGADLFLMPSRFEPCGIGQMIALRYGAVPLVRKTGGLADTVFFHNPLDEKGNGFLF
DRYDPANLLAMLYRAEEAFRYKDYWRRLQLRGMEADLSWRASAHQYADLYKSLIARLG

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=481, Percent_Identity=36.3825363825364, Blast_Score=285, Evalue=6e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_GLOVI (Q7NM37)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923878.1
- ProteinModelPortal:   Q7NM37
- SMR:   Q7NM37
- GeneID:   2599251
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.932
- HOGENOM:   HBG596384
- OMA:   SIHNLLF
- ProtClustDB:   PRK00654
- BioCyc:   GVIO251221:GLR0932-MONOMER
- BRENDA:   2.4.1.21
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 51535; Mature: 51535

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLFAAAECAPLAKVGGMADVVGSLPLALAEMGLDVRIILPYYGFLGELPKSEQPVWTG
CCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCCEEEC
GAMFQQVEIYEARLPGSDIPLYLVGHPAFANERIYGFEDEAWRFTLFSRTVAEFLWRGGW
CHHHHHEEEHEEECCCCCCCEEEEECCCCCCCCEECCCCCCEEEEHHHHHHHHHHHCCCC
DPQVLHCHDWHTGLLPLWMRSMPVMTVFTIHNLAYQGPPLPYFRAFVDVPYDTGAWNPMV
CCCEEEECCCCCCHHHHHHHCCCHHEEEEHHHHHCCCCCCHHHHHHEECCCCCCCCCHHH
AGIIHSDAITAVSPTYAREICTPEYGERLDGLLRGQGNRLTGILNGINTKALDPATDKHL
HHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEE
TVNYDTTSLDRRVENKLALQREFGFEVSADRLLVGIVSRLVDQKGFDLLAPLWDNWMHTS
EEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCC
GAQLVVLGSGDPFYEFLFRSAAERYPDRIKAVLSYNVPIAQRIYGGADLFLMPSRFEPCG
CCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCC
IGQMIALRYGAVPLVRKTGGLADTVFFHNPLDEKGNGFLFDRYDPANLLAMLYRAEEAFR
CCHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
YKDYWRRLQLRGMEADLSWRASAHQYADLYKSLIARLG
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLFAAAECAPLAKVGGMADVVGSLPLALAEMGLDVRIILPYYGFLGELPKSEQPVWTG
CCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCCEEEC
GAMFQQVEIYEARLPGSDIPLYLVGHPAFANERIYGFEDEAWRFTLFSRTVAEFLWRGGW
CHHHHHEEEHEEECCCCCCCEEEEECCCCCCCCEECCCCCCEEEEHHHHHHHHHHHCCCC
DPQVLHCHDWHTGLLPLWMRSMPVMTVFTIHNLAYQGPPLPYFRAFVDVPYDTGAWNPMV
CCCEEEECCCCCCHHHHHHHCCCHHEEEEHHHHHCCCCCCHHHHHHEECCCCCCCCCHHH
AGIIHSDAITAVSPTYAREICTPEYGERLDGLLRGQGNRLTGILNGINTKALDPATDKHL
HHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEE
TVNYDTTSLDRRVENKLALQREFGFEVSADRLLVGIVSRLVDQKGFDLLAPLWDNWMHTS
EEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCC
GAQLVVLGSGDPFYEFLFRSAAERYPDRIKAVLSYNVPIAQRIYGGADLFLMPSRFEPCG
CCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCC
IGQMIALRYGAVPLVRKTGGLADTVFFHNPLDEKGNGFLFDRYDPANLLAMLYRAEEAFR
CCHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
YKDYWRRLQLRGMEADLSWRASAHQYADLYKSLIARLG
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14621292