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The map label for this gene is ctaC [H]

Identifier: 37520308

GI number: 37520308

Start: 790660

End: 791619

Strand: Direct

Name: ctaC [H]

Synonym: gvip077

Alternate gene names: 37520308

Gene position: 790660-791619 (Clockwise)

Preceding gene: 37520307

Following gene: 37520309

Centisome position: 16.97

GC content: 61.77

Gene sequence:

>960_bases
ATGAACCGGTTCGATCGGCTCCCACGGGCCTCCACGATCTTCAAAGTGGTGCTGCTCGTCGTCGCTGTTGTCGTGATCAC
CCTGGCCTCTTTTTTAATTGGCGGCAACATCGACTGGCTGCTGCCCCTGGCCGGTTCGGCGGAGGCGAAGTCGGTAGACC
AGCTTTTTCGGTTCATGGCGATCGTCGGCACGATGATCACCCTGGCCATCGTGGCACTTCTGGTTTATTCGGGTTTCGCC
TTTAAGCGCGCCCCGGACGACTACTCCGACGGCCCGCCCATCGAGGGCAGCCTGCAATTGGAGATTCTTTGGACGATCCT
GCCCATCGTGCTGGTGACGTTTCTGGGGGTCTACAGTTACGACGTGTACCTGAAACTGATACGCAGCAATCCCCAGACCG
GCGCAAGCCATCATCTGGGGCCGAAGTCGCAGTTGCGCGAAGTGGCTCAGGTGACCGACTCCCCCGAGTTGGGTCCCAAA
CGGGAAGGGCAGACCGAACTCACCGTCGCGGTTGAATCGGTGCAGTGGGCCTGGGTATTTACCTACCCCCAGAGCGGCGG
GCTCACCACCGCCGAGTTGCACCTGCCGGTCAACCGGCCCGTGGTGCTGAAGATGACCGCCAAGGACGTCATTCACGGCT
TCTGGGTGCCCGAATTTCGCCTCAAGCAGGACATTATCCCGGGCCGGACTACGGAGATCCGGCTTTTGCCCGACCGGGTG
GGCGAGTACGTGCTGCATTGTACACAACTGTGCGGCACTTACCACGGGGCGATGCGGGCCACCGTCTATGTGCAGACGGC
TGCCGAATTTGAGAAGTGGCGCACTACCCAGGTGGCCGCCGGGGAGCGTGACGCTGCTGTGGCGACCGTCGTTGACCCTG
TGCCTTTGCTGACGCCTGTGCGCTCGCCCCAGACGGCCCGGCTTCTCGAACACCTCCAGCAACCCAACAGAGGATCGTAA

Upstream 100 bases:

>100_bases
AGATGGCCAATGACTTTGGTGTACACAACACGGCGGTGCAACTGCTGCGCAATCCGGCCGCCGATCCGTCGGAGCGTTGT
CGCGTTACGGGGGTGTGCGA

Downstream 100 bases:

>100_bases
TAGTCATGGTCGATGTTTCTGCTTCCCAGACCGCTTCCAACCGGGCGACCGGCGATTGGCGGCGCTATTTCACCTTCAAC
ACCGACCACAAGGTGATCGG

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNRFDRLPRASTIFKVVLLVVAVVVITLASFLIGGNIDWLLPLAGSAEAKSVDQLFRFMAIVGTMITLAIVALLVYSGFA
FKRAPDDYSDGPPIEGSLQLEILWTILPIVLVTFLGVYSYDVYLKLIRSNPQTGASHHLGPKSQLREVAQVTDSPELGPK
REGQTELTVAVESVQWAWVFTYPQSGGLTTAELHLPVNRPVVLKMTAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRV
GEYVLHCTQLCGTYHGAMRATVYVQTAAEFEKWRTTQVAAGERDAAVATVVDPVPLLTPVRSPQTARLLEHLQQPNRGS

Sequences:

>Translated_319_residues
MNRFDRLPRASTIFKVVLLVVAVVVITLASFLIGGNIDWLLPLAGSAEAKSVDQLFRFMAIVGTMITLAIVALLVYSGFA
FKRAPDDYSDGPPIEGSLQLEILWTILPIVLVTFLGVYSYDVYLKLIRSNPQTGASHHLGPKSQLREVAQVTDSPELGPK
REGQTELTVAVESVQWAWVFTYPQSGGLTTAELHLPVNRPVVLKMTAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRV
GEYVLHCTQLCGTYHGAMRATVYVQTAAEFEKWRTTQVAAGERDAAVATVVDPVPLLTPVRSPQTARLLEHLQQPNRGS
>Mature_319_residues
MNRFDRLPRASTIFKVVLLVVAVVVITLASFLIGGNIDWLLPLAGSAEAKSVDQLFRFMAIVGTMITLAIVALLVYSGFA
FKRAPDDYSDGPPIEGSLQLEILWTILPIVLVTFLGVYSYDVYLKLIRSNPQTGASHHLGPKSQLREVAQVTDSPELGPK
REGQTELTVAVESVQWAWVFTYPQSGGLTTAELHLPVNRPVVLKMTAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRV
GEYVLHCTQLCGTYHGAMRATVYVQTAAEFEKWRTTQVAAGERDAAVATVVDPVPLLTPVRSPQTARLLEHLQQPNRGS

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=215, Percent_Identity=26.046511627907, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 35253; Mature: 35253

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFDRLPRASTIFKVVLLVVAVVVITLASFLIGGNIDWLLPLAGSAEAKSVDQLFRFMA
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH
IVGTMITLAIVALLVYSGFAFKRAPDDYSDGPPIEGSLQLEILWTILPIVLVTFLGVYSY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
DVYLKLIRSNPQTGASHHLGPKSQLREVAQVTDSPELGPKREGQTELTVAVESVQWAWVF
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECEEEEEEE
TYPQSGGLTTAELHLPVNRPVVLKMTAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRV
EECCCCCCEEEEEEECCCCCEEEEEEHHHHHHHCCCCCHHHHHCCCCCCCCEEEECHHHH
GEYVLHCTQLCGTYHGAMRATVYVQTAAEFEKWRTTQVAAGERDAAVATVVDPVPLLTPV
HHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHCCHHHCCCCCCCEEEEHCCCCHHCCCC
RSPQTARLLEHLQQPNRGS
CCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRFDRLPRASTIFKVVLLVVAVVVITLASFLIGGNIDWLLPLAGSAEAKSVDQLFRFMA
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH
IVGTMITLAIVALLVYSGFAFKRAPDDYSDGPPIEGSLQLEILWTILPIVLVTFLGVYSY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
DVYLKLIRSNPQTGASHHLGPKSQLREVAQVTDSPELGPKREGQTELTVAVESVQWAWVF
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECEEEEEEE
TYPQSGGLTTAELHLPVNRPVVLKMTAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRV
EECCCCCCEEEEEEECCCCCEEEEEEHHHHHHHCCCCCHHHHHCCCCCCCCEEEECHHHH
GEYVLHCTQLCGTYHGAMRATVYVQTAAEFEKWRTTQVAAGERDAAVATVVDPVPLLTPV
HHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHCCHHHCCCCCCCEEEEHCCCCHHCCCC
RSPQTARLLEHLQQPNRGS
CCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8383492; 8387368; 8905231 [H]