| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520297
Identifier: 37520297
GI number: 37520297
Start: 777907
End: 778560
Strand: Direct
Name: 37520297
Synonym: glr0728
Alternate gene names: NA
Gene position: 777907-778560 (Clockwise)
Preceding gene: 37520296
Following gene: 37520301
Centisome position: 16.7
GC content: 60.09
Gene sequence:
>654_bases ATGAAGCAATTGCTTTACTGGGCCGCAGAAGCCCTGGCCGCCCTCAGCAGAAACCTGCGCTGGATGGGATGGAACCTCTT TCTGGCGCTGGTGCCCCTGGCGTTGAGTTTCTGGCTGTTCGATCCGAAGCGGCGGCGCTCACCGCTATGGTGGGGGGTGG CGGCGGTCTGGCTCGCCTTTTTGCCCAACGCCCCCTATGTTCTTACCGACGTCATTCACCTTATCGAGCAGATCCGCGGC CGAGGTTACTCCGCGTGGGTGATCACTTTGGCGCTCATTCCCCAGTACTTGTTATTTATCCTGGGGGGATTTGAAGCTTA TGTACTGTCGCTGGTCCTGATGGGCCGCTACCTGCGGCGGCAGGGTTTGGCCCGGTTCATTCTGCCGGTTGAACTGGCCA TCCACGCCCTCAGTGCAGTGGGCATCTACCTGGGCCGCTTCCAGCGCTTCAACAGCTGGGACATCATCACCCAGCCCGAC GCCATCGTGGATGACCTGTTCAACGATCTCATCGACAAAGAGCCGCTACTGGTAATGGGGATCAGCTTTGCCGTGGTGGC GGGGCTTTACTACTTGCTCAAGGTCGTGAGCCTGGCGCTTATTTACTACTGGCGCAGGGGGCGTACCCCGGACGGCGCCG AGTGGACTGCGTAG
Upstream 100 bases:
>100_bases TGAGATGCCGTGATCCTAGTTGACGACGTCTGGGAACCGCCCGCTGTCGGTATGCTGAGAAGATGCCGAGCGTGCCTCCC GTTCCGGCTCCACAATCGAC
Downstream 100 bases:
>100_bases GCTGTGGAAAAAGCAGTGCGACGGCCGTTCGCAACCGTGCTTATCGCCCTGCACAAACTGCTGTGGGGTATGGCCCTGGC AGCTGACAGCGACAGGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKQLLYWAAEALAALSRNLRWMGWNLFLALVPLALSFWLFDPKRRRSPLWWGVAAVWLAFLPNAPYVLTDVIHLIEQIRG RGYSAWVITLALIPQYLLFILGGFEAYVLSLVLMGRYLRRQGLARFILPVELAIHALSAVGIYLGRFQRFNSWDIITQPD AIVDDLFNDLIDKEPLLVMGISFAVVAGLYYLLKVVSLALIYYWRRGRTPDGAEWTA
Sequences:
>Translated_217_residues MKQLLYWAAEALAALSRNLRWMGWNLFLALVPLALSFWLFDPKRRRSPLWWGVAAVWLAFLPNAPYVLTDVIHLIEQIRG RGYSAWVITLALIPQYLLFILGGFEAYVLSLVLMGRYLRRQGLARFILPVELAIHALSAVGIYLGRFQRFNSWDIITQPD AIVDDLFNDLIDKEPLLVMGISFAVVAGLYYLLKVVSLALIYYWRRGRTPDGAEWTA >Mature_217_residues MKQLLYWAAEALAALSRNLRWMGWNLFLALVPLALSFWLFDPKRRRSPLWWGVAAVWLAFLPNAPYVLTDVIHLIEQIRG RGYSAWVITLALIPQYLLFILGGFEAYVLSLVLMGRYLRRQGLARFILPVELAIHALSAVGIYLGRFQRFNSWDIITQPD AIVDDLFNDLIDKEPLLVMGISFAVVAGLYYLLKVVSLALIYYWRRGRTPDGAEWTA
Specific function: Unknown
COG id: COG4330
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24903; Mature: 24903
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLYWAAEALAALSRNLRWMGWNLFLALVPLALSFWLFDPKRRRSPLWWGVAAVWLAF CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LPNAPYVLTDVIHLIEQIRGRGYSAWVITLALIPQYLLFILGGFEAYVLSLVLMGRYLRR CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QGLARFILPVELAIHALSAVGIYLGRFQRFNSWDIITQPDAIVDDLFNDLIDKEPLLVMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH ISFAVVAGLYYLLKVVSLALIYYWRRGRTPDGAEWTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKQLLYWAAEALAALSRNLRWMGWNLFLALVPLALSFWLFDPKRRRSPLWWGVAAVWLAF CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LPNAPYVLTDVIHLIEQIRGRGYSAWVITLALIPQYLLFILGGFEAYVLSLVLMGRYLRR CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QGLARFILPVELAIHALSAVGIYLGRFQRFNSWDIITQPDAIVDDLFNDLIDKEPLLVMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH ISFAVVAGLYYLLKVVSLALIYYWRRGRTPDGAEWTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA