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The map label for this gene is ycf50 [H]

Identifier: 37520272

GI number: 37520272

Start: 749223

End: 749807

Strand: Direct

Name: ycf50 [H]

Synonym: gvip071

Alternate gene names: 37520272

Gene position: 749223-749807 (Clockwise)

Preceding gene: 37520271

Following gene: 37520273

Centisome position: 16.08

GC content: 66.32

Gene sequence:

>585_bases
ATGGTGATGAGTAGCTTCTGGTCGAAGGTCAAGGACTTCGTCGGCTTCGGCGATCCCCTTGAGTACGAGGAGGACGGCGA
AGAGTACGAGCAGGTGTATCGCGAAGAAAATAAGCGCGAGGAAGCGCGCAGGGCCACCGCCGGGACCGCCGCTGCCGCTA
CTCCCACCGCCGCCGCCCAGGCGTCCGACGCTGCCCCGATGGGCAGCGGACCGGCGCGCAAGCGGGTGCGTGCGGGCAAC
GTGATCGGCATGCCCAACAGCGGTGTCAACGAGGTGCTCGTCATCGAGCCGCGCTCGTTCGAGGAGGCCCCCCAGATCGT
CCAGCACCTGCGCGATCGCAAGTCGGTCATCCTGAATCTGACCTTGATGGACAGCGACCAGGCCCAGCGCAGCGTCGATT
TTGTGGCCGGGGCCACCTTCGCCATCGACGGCCATCAGGAGCGCGTCGGCGACGGGATCTTCCTGTTTACGCCCAGCAGC
GTCATGATCAGCACCGAAATGCCTTCGCAGCTGCGTCAGGCCAACCAGGCCTTCGGCGGCAACTTCCGGCTCAACCCGGA
AGCCCCCCGCCGCGCCCAGGGCTAG

Upstream 100 bases:

>100_bases
ATGGGCATGTCCGGCGACTATCCGCAGGCGATCGCGGCCGGGGCGACGATGGTACGCCTCGGTCAAGTCCTGTTCGGTTC
ACGTCTACCGCTACGGAGGA

Downstream 100 bases:

>100_bases
AATAAGCGGGCACTCGCGTCCCCCTTGCCCATGAACTTAGGCATTGTCGGCGGCGGTGCGATGGCCGAGGCTTTGATCGC
CGGCCTGATCGCCGGCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVMSSFWSKVKDFVGFGDPLEYEEDGEEYEQVYREENKREEARRATAGTAAAATPTAAAQASDAAPMGSGPARKRVRAGN
VIGMPNSGVNEVLVIEPRSFEEAPQIVQHLRDRKSVILNLTLMDSDQAQRSVDFVAGATFAIDGHQERVGDGIFLFTPSS
VMISTEMPSQLRQANQAFGGNFRLNPEAPRRAQG

Sequences:

>Translated_194_residues
MVMSSFWSKVKDFVGFGDPLEYEEDGEEYEQVYREENKREEARRATAGTAAAATPTAAAQASDAAPMGSGPARKRVRAGN
VIGMPNSGVNEVLVIEPRSFEEAPQIVQHLRDRKSVILNLTLMDSDQAQRSVDFVAGATFAIDGHQERVGDGIFLFTPSS
VMISTEMPSQLRQANQAFGGNFRLNPEAPRRAQG
>Mature_194_residues
MVMSSFWSKVKDFVGFGDPLEYEEDGEEYEQVYREENKREEARRATAGTAAAATPTAAAQASDAAPMGSGPARKRVRAGN
VIGMPNSGVNEVLVIEPRSFEEAPQIVQHLRDRKSVILNLTLMDSDQAQRSVDFVAGATFAIDGHQERVGDGIFLFTPSS
VMISTEMPSQLRQANQAFGGNFRLNPEAPRRAQG

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 21179; Mature: 21179

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMSSFWSKVKDFVGFGDPLEYEEDGEEYEQVYREENKREEARRATAGTAAAATPTAAAQ
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
ASDAAPMGSGPARKRVRAGNVIGMPNSGVNEVLVIEPRSFEEAPQIVQHLRDRKSVILNL
CCCCCCCCCCHHHHHHHCCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEE
TLMDSDQAQRSVDFVAGATFAIDGHQERVGDGIFLFTPSSVMISTEMPSQLRQANQAFGG
EEECCHHHHHHHHHHHCEEEEECCCHHHHCCEEEEEECCCEEEECCCHHHHHHHHHHCCC
NFRLNPEAPRRAQG
CEEECCCCCCCCCC
>Mature Secondary Structure
MVMSSFWSKVKDFVGFGDPLEYEEDGEEYEQVYREENKREEARRATAGTAAAATPTAAAQ
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
ASDAAPMGSGPARKRVRAGNVIGMPNSGVNEVLVIEPRSFEEAPQIVQHLRDRKSVILNL
CCCCCCCCCCHHHHHHHCCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEE
TLMDSDQAQRSVDFVAGATFAIDGHQERVGDGIFLFTPSSVMISTEMPSQLRQANQAFGG
EEECCHHHHHHHHHHHCEEEEECCCHHHHCCEEEEEECCCEEEECCCHHHHHHHHHHCCC
NFRLNPEAPRRAQG
CEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]