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The map label for this gene is yggS [C]

Identifier: 37520271

GI number: 37520271

Start: 748538

End: 749236

Strand: Direct

Name: yggS [C]

Synonym: glr0702

Alternate gene names: 37520271

Gene position: 748538-749236 (Clockwise)

Preceding gene: 37520270

Following gene: 37520272

Centisome position: 16.07

GC content: 63.95

Gene sequence:

>699_bases
GTGGGAGTTGCTGAGCGGATCGAATGGCTTCGGGGGCAACTGCCCGCCGCGGTGCGGCTGGTGGCTGTGACCAAGCAGGT
GCCCGTCGAGCGCATTCGTGAAGCTTACGATTGTGGCCTTCGGGATTTTGGTGAAAGCCGAATTCAGGAAGTCCAACAAA
AAATTCCGCAATTGACGGACCTTCAAGGAGTGTCCTGGCACTTGATTGGCAGTCTGCAGCGCAACAAAGCCCGTCCGGCC
CTGGAAGTATTCGACTGGATCCACTCCGTCGACAGCCTTCCGCTCGCCGAGCGGCTGGCGTCGCTGATGGACAGCGTCGG
TCGCCGACCGCGGCTGCTCCTGCAGGTCAAGCTTGCCGCCGATCCGACCAAATCGGGTTGGTCGCAGGCCGAACTGGAGG
CGGCCCTGCCGCGGCTTGCCGCTTTGCCGCAGCTCGATATCCGGGGGTTGACGGCGATTGCGCCGTTGGGACTCGGCGAG
CAGGGCAACCGGACGCTCTTTGGCCAGGTTGCAGCCCTCGCCCGCGACCTCGGCCGCCGCGCCGGGGAAGCCGGTTGGCA
GCATATCCGCATGGAGGAATTGTCCATGGGCATGTCCGGCGACTATCCGCAGGCGATCGCGGCCGGGGCGACGATGGTAC
GCCTCGGTCAAGTCCTGTTCGGTTCACGTCTACCGCTACGGAGGAATGGTGATGAGTAG

Upstream 100 bases:

>100_bases
CCCACCACTATTCGATTTTTTTTTGGTACAGTTTGACTGACCCAAATTCTCGTTTTACGGGAGTTTATCGAACCGACCAT
GTTAGTTTCGCCTGAACATT

Downstream 100 bases:

>100_bases
CTTCTGGTCGAAGGTCAAGGACTTCGTCGGCTTCGGCGATCCCCTTGAGTACGAGGAGGACGGCGAAGAGTACGAGCAGG
TGTATCGCGAAGAAAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MGVAERIEWLRGQLPAAVRLVAVTKQVPVERIREAYDCGLRDFGESRIQEVQQKIPQLTDLQGVSWHLIGSLQRNKARPA
LEVFDWIHSVDSLPLAERLASLMDSVGRRPRLLLQVKLAADPTKSGWSQAELEAALPRLAALPQLDIRGLTAIAPLGLGE
QGNRTLFGQVAALARDLGRRAGEAGWQHIRMEELSMGMSGDYPQAIAAGATMVRLGQVLFGSRLPLRRNGDE

Sequences:

>Translated_232_residues
MGVAERIEWLRGQLPAAVRLVAVTKQVPVERIREAYDCGLRDFGESRIQEVQQKIPQLTDLQGVSWHLIGSLQRNKARPA
LEVFDWIHSVDSLPLAERLASLMDSVGRRPRLLLQVKLAADPTKSGWSQAELEAALPRLAALPQLDIRGLTAIAPLGLGE
QGNRTLFGQVAALARDLGRRAGEAGWQHIRMEELSMGMSGDYPQAIAAGATMVRLGQVLFGSRLPLRRNGDE
>Mature_231_residues
GVAERIEWLRGQLPAAVRLVAVTKQVPVERIREAYDCGLRDFGESRIQEVQQKIPQLTDLQGVSWHLIGSLQRNKARPAL
EVFDWIHSVDSLPLAERLASLMDSVGRRPRLLLQVKLAADPTKSGWSQAELEAALPRLAALPQLDIRGLTAIAPLGLGEQ
GNRTLFGQVAALARDLGRRAGEAGWQHIRMEELSMGMSGDYPQAIAAGATMVRLGQVLFGSRLPLRRNGDE

Specific function: Unknown

COG id: COG0325

COG function: function code R; Predicted enzyme with a TIM-barrel fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0001 family [H]

Homologues:

Organism=Homo sapiens, GI6005842, Length=214, Percent_Identity=32.7102803738318, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1789321, Length=221, Percent_Identity=37.5565610859729, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17533025, Length=227, Percent_Identity=29.9559471365639, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319435, Length=221, Percent_Identity=27.1493212669683, Blast_Score=79, Evalue=5e-16,
Organism=Drosophila melanogaster, GI45550861, Length=241, Percent_Identity=31.5352697095436, Blast_Score=97, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608
- InterPro:   IPR011078 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: NA

Molecular weight: Translated: 25495; Mature: 25364

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVAERIEWLRGQLPAAVRLVAVTKQVPVERIREAYDCGLRDFGESRIQEVQQKIPQLTD
CCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHC
LQGVSWHLIGSLQRNKARPALEVFDWIHSVDSLPLAERLASLMDSVGRRPRLLLQVKLAA
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECC
DPTKSGWSQAELEAALPRLAALPQLDIRGLTAIAPLGLGEQGNRTLFGQVAALARDLGRR
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AGEAGWQHIRMEELSMGMSGDYPQAIAAGATMVRLGQVLFGSRLPLRRNGDE
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GVAERIEWLRGQLPAAVRLVAVTKQVPVERIREAYDCGLRDFGESRIQEVQQKIPQLTD
CHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHC
LQGVSWHLIGSLQRNKARPALEVFDWIHSVDSLPLAERLASLMDSVGRRPRLLLQVKLAA
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECC
DPTKSGWSQAELEAALPRLAALPQLDIRGLTAIAPLGLGEQGNRTLFGQVAALARDLGRR
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AGEAGWQHIRMEELSMGMSGDYPQAIAAGATMVRLGQVLFGSRLPLRRNGDE
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]