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The map label for this gene is nodJ [H]

Identifier: 37520243

GI number: 37520243

Start: 721182

End: 721973

Strand: Reverse

Name: nodJ [H]

Synonym: gll0674

Alternate gene names: 37520243

Gene position: 721973-721182 (Counterclockwise)

Preceding gene: 37520244

Following gene: 37520240

Centisome position: 15.5

GC content: 61.11

Gene sequence:

>792_bases
GTGAAAGCACTCGCAACTGCCGCCGCCGTCTCACCGTGGGGAGTCTACTCGGTCTGGCGCCGCCACGCGGATGTCTATCG
GATCACGTGGCTCTCCAACTTGCTGCCGCCGATGAGCGAGCCGATTCTGTATCTGTTTGCCTTCGGTGCCGGGCTCGGTC
CCATGATTGGTTCGTTCGAGTACCTGGGCAGCACGCTCACCTATGCGCAGTTTCTGGGTCCGGGGATGATCGCGGTGGCG
GTGTTGTTCCAGTCGTTTTTTGAAGGGGCCTACGCCAGTTTTATTCGTCTGAGTTTCCAGAAGACCTGGCAGGCATTGCT
CACGGCACCCTTGAGCTATACCGACGTGTTTTTGGGCGATTGGCTGTGGGCGACCACCAAGGGGGTCATCGGGGGATCCG
CCACCGGGCTGGTGGTCGTGCTGCTGGGGCTCTATCCGCCGGTGGGGCTGCTCTATTCGCTGCCGGTGATGGTGCTGGGC
GGCATGCTCTTCGGCGCCTGCGGTCTGGTGACGGCGGGTACGGTGCGGATTATCGACCAGGTCAATTTGCCGACGTTTTT
GTTCATCATCCCGATGTTTGCCTTGAGCGGGACGTATTTTCCGCGCACCAACCTGCCGGGGGTGAGCCGCTACTTTGCCG
AAATTTTGCCCTTGGCGCCGGTGGTCGATTTTCTGCGCTGGCCCTACGGGTTACCCAGCTACTGGCCCTGGCAACTCGTG
GGGCTCGTCGTGCTGATTGCCGTCGCCGGAAGCTGGGCTTGGTGGGCAATCCGGCAGCGCATTTATTTGTGA

Upstream 100 bases:

>100_bases
AAGCCCTCTGGCAGGCGATTGTCGAACTGAAGCCCGCCCGGCTCACCCGCAGGCGGGCCAATTTAGAAGATGTCTTCTTG
CAGCTGACCGGAGGGAGACT

Downstream 100 bases:

>100_bases
AGCAGTGATTGCTACCTGCGGCCATCCAGGTCGAAATGGCGCCATAGCAAATCTCGATTGAGCCTGACGGTTTCGGTCGC
TTTATCAAGAGTGAGAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKALATAAAVSPWGVYSVWRRHADVYRITWLSNLLPPMSEPILYLFAFGAGLGPMIGSFEYLGSTLTYAQFLGPGMIAVA
VLFQSFFEGAYASFIRLSFQKTWQALLTAPLSYTDVFLGDWLWATTKGVIGGSATGLVVVLLGLYPPVGLLYSLPVMVLG
GMLFGACGLVTAGTVRIIDQVNLPTFLFIIPMFALSGTYFPRTNLPGVSRYFAEILPLAPVVDFLRWPYGLPSYWPWQLV
GLVVLIAVAGSWAWWAIRQRIYL

Sequences:

>Translated_263_residues
MKALATAAAVSPWGVYSVWRRHADVYRITWLSNLLPPMSEPILYLFAFGAGLGPMIGSFEYLGSTLTYAQFLGPGMIAVA
VLFQSFFEGAYASFIRLSFQKTWQALLTAPLSYTDVFLGDWLWATTKGVIGGSATGLVVVLLGLYPPVGLLYSLPVMVLG
GMLFGACGLVTAGTVRIIDQVNLPTFLFIIPMFALSGTYFPRTNLPGVSRYFAEILPLAPVVDFLRWPYGLPSYWPWQLV
GLVVLIAVAGSWAWWAIRQRIYL
>Mature_263_residues
MKALATAAAVSPWGVYSVWRRHADVYRITWLSNLLPPMSEPILYLFAFGAGLGPMIGSFEYLGSTLTYAQFLGPGMIAVA
VLFQSFFEGAYASFIRLSFQKTWQALLTAPLSYTDVFLGDWLWATTKGVIGGSATGLVVVLLGLYPPVGLLYSLPVMVLG
GMLFGACGLVTAGTVRIIDQVNLPTFLFIIPMFALSGTYFPRTNLPGVSRYFAEILPLAPVVDFLRWPYGLPSYWPWQLV
GLVVLIAVAGSWAWWAIRQRIYL

Specific function: Part of the ABC transporter complex nodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=250, Percent_Identity=26, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- InterPro:   IPR005981 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28939; Mature: 28939

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]