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The map label for this gene is ydeS [H]

Identifier: 37520240

GI number: 37520240

Start: 719101

End: 719715

Strand: Reverse

Name: ydeS [H]

Synonym: gll0671

Alternate gene names: 37520240

Gene position: 719715-719101 (Counterclockwise)

Preceding gene: 37520243

Following gene: 37520239

Centisome position: 15.45

GC content: 61.79

Gene sequence:

>615_bases
ATGCTTTCTGGGGTGAGCGCCGAGAACGAACAGACCAAAAATCCACCGGGCCGACCGCGCAGTTCGCGGGCCGACCAGGC
TATTCTTGGAGCGGCGGCCGAACTGTTGGCGGAGGTCGGCTACCAGGCGATGAGCATCGAAGCCGTTGCCCTTCGCGCCG
GGGTGAGCAAGCCGACCATCTACCGGCGGTACGCCTCCAAGGAAGAACTGGTCGCCGATGCCATCGAGACGTTGCGCCAG
GAAGTGGCGATCCCGGATACCGGCAGCCTGCAGACGGACATCGACAGCTTGCTGGCAGAAGCGATTCAGATGGTGCAGAC
CCCGCTTGCCCGCCAGACGATGGCAATGATTATCAGTTCGGCGACGAGCAGTCCCCAGTTCGCCCGCATCTACGCGACAA
AGTACTTGATGCCCCGCCGCGAAGCTTTCGGCGCCATCCTGGAGCGCGCCAAAGCCAGAAATGAGATCCGTGCGGCCACC
GACAACGATCTGTTCTTCGACTTCGTAAGCGGGATCATGTTCCACGCATTGATTTTCGAACCCACAGCAGAGCCCTACGA
GGCTTACATCCGGCGGGCCGTGCGATTTCTGCTGGGTGGCGCCGCTGTCCGATGA

Upstream 100 bases:

>100_bases
CGTCCATAAGCTCTCCTTGCCACTCGAATAATAAAGATACGATACAGTATCGTAAATCGAGATCTGCTGGTCAAGTGCCC
GCCGGTGCTTGGGGGAAGGT

Downstream 100 bases:

>100_bases
TCGACCACATCGGTATCGCTCAGAGCGATTCCAGGCCACCTGTCACATCCGGACCCGCCGTTTCGTCTTGTTTATACAAG
CGATACAACCGGAGCTTCCA

Product: TetR family transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLSGVSAENEQTKNPPGRPRSSRADQAILGAAAELLAEVGYQAMSIEAVALRAGVSKPTIYRRYASKEELVADAIETLRQ
EVAIPDTGSLQTDIDSLLAEAIQMVQTPLARQTMAMIISSATSSPQFARIYATKYLMPRREAFGAILERAKARNEIRAAT
DNDLFFDFVSGIMFHALIFEPTAEPYEAYIRRAVRFLLGGAAVR

Sequences:

>Translated_204_residues
MLSGVSAENEQTKNPPGRPRSSRADQAILGAAAELLAEVGYQAMSIEAVALRAGVSKPTIYRRYASKEELVADAIETLRQ
EVAIPDTGSLQTDIDSLLAEAIQMVQTPLARQTMAMIISSATSSPQFARIYATKYLMPRREAFGAILERAKARNEIRAAT
DNDLFFDFVSGIMFHALIFEPTAEPYEAYIRRAVRFLLGGAAVR
>Mature_204_residues
MLSGVSAENEQTKNPPGRPRSSRADQAILGAAAELLAEVGYQAMSIEAVALRAGVSKPTIYRRYASKEELVADAIETLRQ
EVAIPDTGSLQTDIDSLLAEAIQMVQTPLARQTMAMIISSATSSPQFARIYATKYLMPRREAFGAILERAKARNEIRAAT
DNDLFFDFVSGIMFHALIFEPTAEPYEAYIRRAVRFLLGGAAVR

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22344; Mature: 22344

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGVSAENEQTKNPPGRPRSSRADQAILGAAAELLAEVGYQAMSIEAVALRAGVSKPTI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHH
YRRYASKEELVADAIETLRQEVAIPDTGSLQTDIDSLLAEAIQMVQTPLARQTMAMIISS
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSSPQFARIYATKYLMPRREAFGAILERAKARNEIRAATDNDLFFDFVSGIMFHALIFE
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
PTAEPYEAYIRRAVRFLLGGAAVR
CCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSGVSAENEQTKNPPGRPRSSRADQAILGAAAELLAEVGYQAMSIEAVALRAGVSKPTI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHH
YRRYASKEELVADAIETLRQEVAIPDTGSLQTDIDSLLAEAIQMVQTPLARQTMAMIISS
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSSPQFARIYATKYLMPRREAFGAILERAKARNEIRAATDNDLFFDFVSGIMFHALIFE
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
PTAEPYEAYIRRAVRFLLGGAAVR
CCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]