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The map label for this gene is yjbQ [C]

Identifier: 37520197

GI number: 37520197

Start: 670885

End: 671304

Strand: Direct

Name: yjbQ [C]

Synonym: glr0628

Alternate gene names: 37520197

Gene position: 670885-671304 (Clockwise)

Preceding gene: 37520195

Following gene: 37520198

Centisome position: 14.4

GC content: 61.19

Gene sequence:

>420_bases
ATGATGCACCACCAGCAGATACTCAAGCTGCAGACCCGAGGCCAGTCTCTCTACCCTATCACCGGGGCAGTGGGCGAAGT
GGTGAATCAATCCGGTGTACAGATGGGCTTATGCACCTTGTTTTTGCGCCACACTTCCGCCAGCCTGCTTATCCAGGAGA
ACGCCGATCCCGATGTACTGGCCGATCTGGAGAGCTTTTTGGCCAAGCTCGTGCCGGAGGACGCCCGGTCCTACCGCCAC
AACGCCGAGGGGCCGGACGATATGCCCGCCCATATTCGCACCGCCCTCACCCACACCAGCGAGAACATTCCGGTGAGCGA
CGGCCGACTGGTACTGGGCACCTGGCAGGGCATCTATATCTGGGAGCACCGCCGCCACCGCCAACTGCGCGAGGTCGTGG
TGCACATCGCCGGAAATTAA

Upstream 100 bases:

>100_bases
AGAAGATGACGCGAATTACAATGTGCTATGTCAATTATCTGCGCTATTGCAGGTCCGAGACATCACACTTCAACAGATAT
TCCGAGCATAGCGCCGCGCC

Downstream 100 bases:

>100_bases
GGCCGGATGTCCTCAAGCGGTTAAAATTGGGGGCATGGGACTGGCGATGCAGCGATCGATCGAAGGGCTGGCAGGCGGGG
AGCGCGACGAGATGCTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MMHHQQILKLQTRGQSLYPITGAVGEVVNQSGVQMGLCTLFLRHTSASLLIQENADPDVLADLESFLAKLVPEDARSYRH
NAEGPDDMPAHIRTALTHTSENIPVSDGRLVLGTWQGIYIWEHRRHRQLREVVVHIAGN

Sequences:

>Translated_139_residues
MMHHQQILKLQTRGQSLYPITGAVGEVVNQSGVQMGLCTLFLRHTSASLLIQENADPDVLADLESFLAKLVPEDARSYRH
NAEGPDDMPAHIRTALTHTSENIPVSDGRLVLGTWQGIYIWEHRRHRQLREVVVHIAGN
>Mature_139_residues
MMHHQQILKLQTRGQSLYPITGAVGEVVNQSGVQMGLCTLFLRHTSASLLIQENADPDVLADLESFLAKLVPEDARSYRH
NAEGPDDMPAHIRTALTHTSENIPVSDGRLVLGTWQGIYIWEHRRHRQLREVVVHIAGN

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=138, Percent_Identity=39.1304347826087, Blast_Score=108, Evalue=1e-25,
Organism=Drosophila melanogaster, GI221476594, Length=104, Percent_Identity=49.0384615384615, Blast_Score=112, Evalue=1e-25,
Organism=Drosophila melanogaster, GI221476589, Length=104, Percent_Identity=49.0384615384615, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15593; Mature: 15593

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHHQQILKLQTRGQSLYPITGAVGEVVNQSGVQMGLCTLFLRHTSASLLIQENADPDVL
CCCHHHHHHHHHCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCHHH
ADLESFLAKLVPEDARSYRHNAEGPDDMPAHIRTALTHTSENIPVSDGRLVLGTWQGIYI
HHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEE
WEHRRHRQLREVVVHIAGN
EHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMHHQQILKLQTRGQSLYPITGAVGEVVNQSGVQMGLCTLFLRHTSASLLIQENADPDVL
CCCHHHHHHHHHCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCHHH
ADLESFLAKLVPEDARSYRHNAEGPDDMPAHIRTALTHTSENIPVSDGRLVLGTWQGIYI
HHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEE
WEHRRHRQLREVVVHIAGN
EHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]