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The map label for this gene is yoaA [H]

Identifier: 37520183

GI number: 37520183

Start: 655817

End: 657976

Strand: Reverse

Name: yoaA [H]

Synonym: gll0614

Alternate gene names: 37520183

Gene position: 657976-655817 (Counterclockwise)

Preceding gene: 37520186

Following gene: 37520182

Centisome position: 14.12

GC content: 62.78

Gene sequence:

>2160_bases
GTGTTGCTAGCTACTTTAGCCAAGATGCTCATCAAGCTGACAGCTCCCACCCCCGACGAGCGGCCACTCGAGCCACAGTG
CGCGATTGGCGGAAGACTGAATGCGCCAGTACCGGTATCGCCCTGGCCATCACCCGCTACCGTACAGCTAAATGCCAATG
TCGGTGGGTCGCAAGGTAGACAGATGAGCCCCTACACTAGACAAATGATTAGCCTCAGCGATGCCTTCGAGGACGTGGCC
CGGGTGCTGCCGGGCTACGAGGTGCGCCAGCCCCAGCTGGATATGGCCCGCGCCGTCGAGCGGGGCTTCGCCGAACGCAT
CGCGGTGGTGGCGGAGGCGGGCACCGGCACCGGCAAGAGTTTTAGCGCCCTTGTCCCGGCCATCCTCAGCGGCAAGCGGG
TGGTGATTTCGACGGCCACCATCGCCCTGCAGGAGCAGTATCTCTACAAAGACATTCCTTTGCTGCAAAAGGCGCTCCCG
GTGCGCTTCGAGGCGCGGCTGGTCAAAGGCCGCAGCCACTATGTCTCGAAGCGGCGCTGGTCAGAATCGCTGCTCGCTCC
GGGGATCACCTGGTTGCGCGAGTGGTACGAGCAGACCGAAAGCGGCGATCTGGCCGACCTGCCCACCAGTCCGCCTTCCG
AAATCTGGGACGACATCCGCTCCGACAAAGACGATTGCCTGCGCGAGAAGTGTCCTCACTTTGATAGCTGCTTTTATTTC
GAGTCGCGCCGCTCGCTCGGGCAGGCACAGATTTTGATCACCAACCACGCGCTATTGCTGATTGATCGGGCAAGCCACGG
GCAGATCCTCCCCGACTTCGACTTGCTGGTCATCGACGAGGCCCATCAATTTGCCGAGTACGCCACCCGTGCCCTGACGC
TCACCCTCAGCAACTTCGGCATGGGCCGCACCCTGAGCCGAATCAAAAAGCAGTTTCCCAACCTGGGCATCGCCCTGGCG
CGGGCGGAGGCGGAGGCGAACGCCTTCTTCGAAGTGCTGCTTACCGAAGCGCACCAGACGCGCCGCTACAATCTCGACCC
GGCGATGGCCGACGATCTGTCGGCGGCCGTCGTGCGGCTGTTGCAATCGCTCAAGGAACTGAACCTGGGAAGCGAGGACA
ACCTCGAAACGAACGTGGCGCGCATGCGCCGCGACCGGCTGGTGGAGACGCTCACCGGCTACGAGGGCAATTTGCGTGTC
CTTGCTGAGCCAGGAGAAAACTGGGTCAACTGGGTCGAATATCAGACGACGCGCGGCGGCGGGACCAATGTCGCACTCAA
CTGCACGCCCCTGGATGTGGCACCGCCGTTGGGTCAGTGGTTCAGTCACCCGGACGGACCGACCGCCGTCTGGATGTCGG
CCACCCTCAGCACCGCCGGGGCGGACCCGTTCGATTTTTTTCGCCGCCAGGTGGGGCTACCGGCTGGAACCGCCGAGGAG
CGCATCTTTGCCAGCCCCTTCGATTACCCGAGCCAGGGTTTGCTATACCTGCCCACCCATCTGCCTGACCCGAATGACGC
CAGTTACGCAAACGCCATCGCCGCCGAAATTGAGAAGCTGGTCAATTTCTCGGAGGGCCGCGCCTTTGTGCTCTTTACCA
GCCTCCAGCAGATGAAGCAGGTATATGCCCTGCTCGAAGCGAAGTTGCTCTGGCCCGCGCAGCACCAGGAGCAAATGCCC
AAGCGCCGCCTGGTCGAATGGTTCCGCACGGTCAAAAACCCGGTGCTCTTTGCCACGGCAAGTTTCTGGGAAGGGGTGAG
CGTCGAAGGACCGCAATTGAGCCTGGTGGTTATCGACCGCATTCCGTTTCAGTCGCCCGGCGACATCGTCTACGACGCGC
GCTGCGAGCTGCTCTCGCGCACCAGCGGCGATCGGTGGGCCTGGTTCGACCGGCTCGCCCTGCCCTATGCCCAGTTGCGG
CTCAAACAGGGAGCGGGCCGCCTCGTCCGTACCCGCACCGACAAAGGCATCGTCGCCATTCTCGACCCGCGCATGCATCG
CAAAGCCTACGGCAAGACCATTCTCAAGTCGCTGCCGCCGATGCAGGTGAGCCGTCGCTTCGACCCGCGGCTGTTTCGTG
CGTTCATCGACCCAGCCGGCACCGGCGTCAGCGTCGAGGACGACGAGCTATGGGTGCAGGATTTTGGTTTGGGCATCTAA

Upstream 100 bases:

>100_bases
CGCATTTCATCGCCAAGTTGATTCGGGGTGAGTTTGAGCGCCAGTAAAATTTCATCCGGGAGCGACAGGGTAACGTCGGG
CATTGGAGCTTCCGCCAGAA

Downstream 100 bases:

>100_bases
ACTGTGATGATGACATACCGCGGGTAAAGCGATGGTGCAAGTCGTTGCGGCAGGAGATCTGGAATTCATCGATCTTGAAA
CAAAATTTGGCCTGGCTCGC

Product: ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGRQMSPYTRQMISLSDAFEDVA
RVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKSFSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALP
VRFEARLVKGRSHYVSKRRWSESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF
ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFGMGRTLSRIKKQFPNLGIALA
RAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRLLQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRV
LAEPGENWVNWVEYQTTRGGGTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE
RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQVYALLEAKLLWPAQHQEQMP
KRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDRIPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLR
LKQGAGRLVRTRTDKGIVAILDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI

Sequences:

>Translated_719_residues
MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGRQMSPYTRQMISLSDAFEDVA
RVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKSFSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALP
VRFEARLVKGRSHYVSKRRWSESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF
ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFGMGRTLSRIKKQFPNLGIALA
RAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRLLQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRV
LAEPGENWVNWVEYQTTRGGGTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE
RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQVYALLEAKLLWPAQHQEQMP
KRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDRIPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLR
LKQGAGRLVRTRTDKGIVAILDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI
>Mature_719_residues
MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGRQMSPYTRQMISLSDAFEDVA
RVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKSFSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALP
VRFEARLVKGRSHYVSKRRWSESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF
ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFGMGRTLSRIKKQFPNLGIALA
RAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRLLQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRV
LAEPGENWVNWVEYQTTRGGGTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE
RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQVYALLEAKLLWPAQHQEQMP
KRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDRIPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLR
LKQGAGRLVRTRTDKGIVAILDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=640, Percent_Identity=32.65625, Blast_Score=298, Evalue=8e-82,
Organism=Escherichia coli, GI1787018, Length=681, Percent_Identity=27.6064610866373, Blast_Score=144, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 80306; Mature: 80306

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGR
CHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
QMSPYTRQMISLSDAFEDVARVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCH
FSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALPVRFEARLVKGRSHYVSKRRW
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH
SESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF
HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEE
ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFG
HHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEECCCC
MGRTLSRIKKQFPNLGIALARAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRL
CCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRVLAEPGENWVNWVEYQTTRGG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHEEEEEEEECCC
GTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE
CCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCC
RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQ
CEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
VYALLEAKLLWPAQHQEQMPKRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDR
HHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCEEEEEEEEC
IPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLRLKQGAGRLVRTRTDKGIVAI
CCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEE
LDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI
ECCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGR
CHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
QMSPYTRQMISLSDAFEDVARVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCH
FSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALPVRFEARLVKGRSHYVSKRRW
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH
SESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF
HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEE
ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFG
HHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEECCCC
MGRTLSRIKKQFPNLGIALARAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRL
CCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRVLAEPGENWVNWVEYQTTRGG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHEEEEEEEECCC
GTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE
CCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCC
RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQ
CEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
VYALLEAKLLWPAQHQEQMPKRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDR
HHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCEEEEEEEEC
IPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLRLKQGAGRLVRTRTDKGIVAI
CCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEE
LDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI
ECCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]