| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is kdpD [H]
Identifier: 37520139
GI number: 37520139
Start: 606611
End: 608875
Strand: Reverse
Name: kdpD [H]
Synonym: gvip061
Alternate gene names: 37520139
Gene position: 608875-606611 (Counterclockwise)
Preceding gene: 37520140
Following gene: 37520138
Centisome position: 13.07
GC content: 66.36
Gene sequence:
>2265_bases ATGTTCCGCCCGAACGAAGACTGTCCTGATCCCCAGTCGTTGCTGCACGAGCTGATGCAGCTGTCGCGGGGTCGCCTGAA GCTTTACCTGGGCTACACGCCCGGGGTCGGAAAAACCGTGCGCATGCTCCAGGAGGCCCGCCGACTGCGCCGCCGCGGCG TCGATCTGGTGGTCGGCTGGGTGGAGACCCACGGCCGCCCCGACACCGAAGCGTTGCTCGCGGATCTCGAAGTGATGGCG CCGCGCCAGGTCGCCTACCAGGGTGTGATCATCCCGGAACTCGACTTGGAGGCGATTTTGCAGCGGCGGCCGGCCACGGT GCTCATCGATGAGCTGGCCCACACCAATGCCCCCGGCAGCCGCCACCGCAAGCGCTACGAAGATGTGGAGGTGCTGCTCG ATGCCGGCGTGAGCGTGATGAGCGCCATGAACATCCAGCACCTCGAAAGCGTCGCCGAGGCCGCCGGACGTCTGATTGGG GCGGTTGTGCACGAGACGGTGCCCGACCGGCTGTTGCGCAGTGCCGAGGAGGTGCAACTGGTCGATGCGAGCCCGGAGGC GGTCCTGGAGCGGCTGCAGCGCGGCGATGCGGCCAGGTACATTCCTCCCGGCAGCCCTTTTTTGCGCCGCAGTACCCTGG TCTACCTGCGTGAACTGGCCCTGCGCGCAGTTGCCGAGGTGGTCGATGCCGACATCCTGTCGGGCAAGAACGGCGTGGCA GGTCCGGCGGGGGTGCGCGAACGGGTACTCGCGGCGGTAAGCACCAATCCGGCTTCCGCCCGGCTCATCCGCCGCGGGGC GCGCATTGCCGAGCGGCTCGACGCCGAATTGTTCGTGGCCTACGTCGAGACGGGTAGGCCGCTCGCTCCCCCCGAAGCGC AGACCTTGCAGGAGCACCGCGCGGCCACCGAGGCGGCGGCGGGCGAATTTGTGCAGCTGCAAAACCGCGATGTGGCCGGG GCTCTCATCGACTTTGCTCTGCAAAAAAATATCACCCAGGTGATCGTCGGCGAGTCGTTGCGCTCCCCCGCTGAAGAACT GGTGCGCGGTTCGGTGATCAACACGCTGCTGCGCACCACCAGCAACATCGACGTGTTGATTGTGGGAGAGGCCGAGTCGT CGATGGTCGGCCCACTGACTCCGGTCGCAGCCCAGCCGCCCTTCGCTGTCGGCTGTTTGCTCGTAGGCGCGGACTCTCGC CGTGCCCACGGTTGCGGACGGCACAAAATTTACCTGGGTGCCGCCCCCGGCGTCGGCAAAACCTTCGCAATGCTTCAAGA AGCCCACCACCTGCACGCCAGCGGCATCGACGTCGTCTGCGGGGTGATCGAGACCCACGGCCGTGCCGAGACGGCGGCCC TCATCGAGAACCTGGAGGTGGTGCCCAAGCGGGCGATTGGCTACCAGGGGCGCACATTTTTGGAGCTGGATGTCGAGGCG GTGCTGCGGCGGCGTCCGGCCGTCGTGCTCGTCGACGAGTTGGCCCACACCAACATCGCGGGTGCCGGCAACACCAAACG TTTCCAGGATGTAGAGGTACTGCTTGGCGCGGGCATCGATGTGGTCTCCACCCTCAACATCCAGCACCTCGAAAGCCTCA ATACCCTCGTCGAGCGCACCACCGGCGTCAAAGTCCGCGAGACCCTGCCGGATCTGGTCGTCGAGGCGGCCGACGAAGTC GTGCTGGTGGATCTGCCCACGGGCGAACTCACCCAGCGGCTGCGCGAGGGCAAAATCTACGCCCAGGCCAAAGTCGAGCA GGCGCTGGCCAATTTCTTCCGCCCCGAAAATCTGTCGGCTCTACGCGAACTGGCCTTGCGGGAAGTGGCCGACGACTGCA CCACGCGCAAACTCGAAGAGGCCGCGCATGGACCGGGCGGCCGTGTGCTTGTCTGCATCAATCTGCGCCCGAATGCCGAG CAACTCATCCGCCGGGGGGCGCGCATCGCCAGCCGGTTGAGCGCACCGCTGGTGGTCGCCCACATCGGCGCGCACGACGA CGGGCCGACCGCCCGGGCCGTCGAGCGCCTGGGCGAACTGACGCGCCAGTTGGGCGGTGAATTTATCGAGCGTCCCGCCG CCGCCAATCAGGTTCCCGAGCAAATCGACGCGCTTGCTCACGAGCAGGGGGTGACGCTGCTGGTGATGGGTGAATCGCGC CGCTCGCGCTGGGAAAAACTGCTCCACGGCTGCGTCATTGAACAGGTGGTACGCCGGGTGCGCAACCTGGATGTGCTGAT CGTGGGCGATCTTGAACACGAGTAG
Upstream 100 bases:
>100_bases CATCCTGCGCAAGCTCGGGGCGACCGATCGCACCCAGGCTGCCGTCCTTGCCCTCGAAAAGGGTTTGATCGCTCCTCCTT AACCGTAACTGTGGGTCGCC
Downstream 100 bases:
>100_bases CAGCCGCGCACAAATCTCAATAGACTTGCCAGCTTGCGCATCAAGTGAATTAACAATTTTTGCTAAATTGGATTTAGTCT TTTTTGAGAGGGCACCTCCC
Product: potassium-transporting P-type ATPase D chain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MFRPNEDCPDPQSLLHELMQLSRGRLKLYLGYTPGVGKTVRMLQEARRLRRRGVDLVVGWVETHGRPDTEALLADLEVMA PRQVAYQGVIIPELDLEAILQRRPATVLIDELAHTNAPGSRHRKRYEDVEVLLDAGVSVMSAMNIQHLESVAEAAGRLIG AVVHETVPDRLLRSAEEVQLVDASPEAVLERLQRGDAARYIPPGSPFLRRSTLVYLRELALRAVAEVVDADILSGKNGVA GPAGVRERVLAAVSTNPASARLIRRGARIAERLDAELFVAYVETGRPLAPPEAQTLQEHRAATEAAAGEFVQLQNRDVAG ALIDFALQKNITQVIVGESLRSPAEELVRGSVINTLLRTTSNIDVLIVGEAESSMVGPLTPVAAQPPFAVGCLLVGADSR RAHGCGRHKIYLGAAPGVGKTFAMLQEAHHLHASGIDVVCGVIETHGRAETAALIENLEVVPKRAIGYQGRTFLELDVEA VLRRRPAVVLVDELAHTNIAGAGNTKRFQDVEVLLGAGIDVVSTLNIQHLESLNTLVERTTGVKVRETLPDLVVEAADEV VLVDLPTGELTQRLREGKIYAQAKVEQALANFFRPENLSALRELALREVADDCTTRKLEEAAHGPGGRVLVCINLRPNAE QLIRRGARIASRLSAPLVVAHIGAHDDGPTARAVERLGELTRQLGGEFIERPAAANQVPEQIDALAHEQGVTLLVMGESR RSRWEKLLHGCVIEQVVRRVRNLDVLIVGDLEHE
Sequences:
>Translated_754_residues MFRPNEDCPDPQSLLHELMQLSRGRLKLYLGYTPGVGKTVRMLQEARRLRRRGVDLVVGWVETHGRPDTEALLADLEVMA PRQVAYQGVIIPELDLEAILQRRPATVLIDELAHTNAPGSRHRKRYEDVEVLLDAGVSVMSAMNIQHLESVAEAAGRLIG AVVHETVPDRLLRSAEEVQLVDASPEAVLERLQRGDAARYIPPGSPFLRRSTLVYLRELALRAVAEVVDADILSGKNGVA GPAGVRERVLAAVSTNPASARLIRRGARIAERLDAELFVAYVETGRPLAPPEAQTLQEHRAATEAAAGEFVQLQNRDVAG ALIDFALQKNITQVIVGESLRSPAEELVRGSVINTLLRTTSNIDVLIVGEAESSMVGPLTPVAAQPPFAVGCLLVGADSR RAHGCGRHKIYLGAAPGVGKTFAMLQEAHHLHASGIDVVCGVIETHGRAETAALIENLEVVPKRAIGYQGRTFLELDVEA VLRRRPAVVLVDELAHTNIAGAGNTKRFQDVEVLLGAGIDVVSTLNIQHLESLNTLVERTTGVKVRETLPDLVVEAADEV VLVDLPTGELTQRLREGKIYAQAKVEQALANFFRPENLSALRELALREVADDCTTRKLEEAAHGPGGRVLVCINLRPNAE QLIRRGARIASRLSAPLVVAHIGAHDDGPTARAVERLGELTRQLGGEFIERPAAANQVPEQIDALAHEQGVTLLVMGESR RSRWEKLLHGCVIEQVVRRVRNLDVLIVGDLEHE >Mature_754_residues MFRPNEDCPDPQSLLHELMQLSRGRLKLYLGYTPGVGKTVRMLQEARRLRRRGVDLVVGWVETHGRPDTEALLADLEVMA PRQVAYQGVIIPELDLEAILQRRPATVLIDELAHTNAPGSRHRKRYEDVEVLLDAGVSVMSAMNIQHLESVAEAAGRLIG AVVHETVPDRLLRSAEEVQLVDASPEAVLERLQRGDAARYIPPGSPFLRRSTLVYLRELALRAVAEVVDADILSGKNGVA GPAGVRERVLAAVSTNPASARLIRRGARIAERLDAELFVAYVETGRPLAPPEAQTLQEHRAATEAAAGEFVQLQNRDVAG ALIDFALQKNITQVIVGESLRSPAEELVRGSVINTLLRTTSNIDVLIVGEAESSMVGPLTPVAAQPPFAVGCLLVGADSR RAHGCGRHKIYLGAAPGVGKTFAMLQEAHHLHASGIDVVCGVIETHGRAETAALIENLEVVPKRAIGYQGRTFLELDVEA VLRRRPAVVLVDELAHTNIAGAGNTKRFQDVEVLLGAGIDVVSTLNIQHLESLNTLVERTTGVKVRETLPDLVVEAADEV VLVDLPTGELTQRLREGKIYAQAKVEQALANFFRPENLSALRELALREVADDCTTRKLEEAAHGPGGRVLVCINLRPNAE QLIRRGARIASRLSAPLVVAHIGAHDDGPTARAVERLGELTRQLGGEFIERPAAANQVPEQIDALAHEQGVTLLVMGESR RSRWEKLLHGCVIEQVVRRVRNLDVLIVGDLEHE
Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon. KdpD may function as a membrane-associated protein kinase that phosphorylates kdpE in response to environmental signals [H]
COG id: COG2205
COG function: function code T; Osmosensitive K+ channel histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the universal stress protein A family [H]
Homologues:
Organism=Escherichia coli, GI1786912, Length=257, Percent_Identity=51.7509727626459, Blast_Score=256, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR003852 - InterPro: IPR006016 [H]
Pfam domain/function: PF02702 KdpD; PF00582 Usp [H]
EC number: 2.7.3.-
Molecular weight: Translated: 82009; Mature: 82009
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRPNEDCPDPQSLLHELMQLSRGRLKLYLGYTPGVGKTVRMLQEARRLRRRGVDLVVGW CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEE VETHGRPDTEALLADLEVMAPRQVAYQGVIIPELDLEAILQRRPATVLIDELAHTNAPGS HHHCCCCCHHHHHHHHHHHCCHHHHHCCEECCCCCHHHHHHCCCHHHHHHHHHHCCCCCH RHRKRYEDVEVLLDAGVSVMSAMNIQHLESVAEAAGRLIGAVVHETVPDRLLRSAEEVQL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEE VDASPEAVLERLQRGDAARYIPPGSPFLRRSTLVYLRELALRAVAEVVDADILSGKNGVA ECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GPAGVRERVLAAVSTNPASARLIRRGARIAERLDAELFVAYVETGRPLAPPEAQTLQEHR CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHEEEEHHCCCCCCCCCHHHHHHHH AATEAAAGEFVQLQNRDVAGALIDFALQKNITQVIVGESLRSPAEELVRGSVINTLLRTT HHHHHHCCCCEEECCCCHHHHHHHHHHHHCHHHHHHCHHHCCHHHHHHHHHHHHHHHHCC SNIDVLIVGEAESSMVGPLTPVAAQPPFAVGCLLVGADSRRAHGCGRHKIYLGAAPGVGK CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHH TFAMLQEAHHLHASGIDVVCGVIETHGRAETAALIENLEVVPKRAIGYQGRTFLELDVEA HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHH VLRRRPAVVLVDELAHTNIAGAGNTKRFQDVEVLLGAGIDVVSTLNIQHLESLNTLVERT HHHCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH TGVKVRETLPDLVVEAADEVVLVDLPTGELTQRLREGKIYAQAKVEQALANFFRPENLSA CCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH LRELALREVADDCTTRKLEEAAHGPGGRVLVCINLRPNAEQLIRRGARIASRLSAPLVVA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEE HIGAHDDGPTARAVERLGELTRQLGGEFIERPAAANQVPEQIDALAHEQGVTLLVMGESR EECCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHCCCHHHHHHHHHHCCCEEEEECCHH RSRWEKLLHGCVIEQVVRRVRNLDVLIVGDLEHE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure MFRPNEDCPDPQSLLHELMQLSRGRLKLYLGYTPGVGKTVRMLQEARRLRRRGVDLVVGW CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEE VETHGRPDTEALLADLEVMAPRQVAYQGVIIPELDLEAILQRRPATVLIDELAHTNAPGS HHHCCCCCHHHHHHHHHHHCCHHHHHCCEECCCCCHHHHHHCCCHHHHHHHHHHCCCCCH RHRKRYEDVEVLLDAGVSVMSAMNIQHLESVAEAAGRLIGAVVHETVPDRLLRSAEEVQL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEE VDASPEAVLERLQRGDAARYIPPGSPFLRRSTLVYLRELALRAVAEVVDADILSGKNGVA ECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GPAGVRERVLAAVSTNPASARLIRRGARIAERLDAELFVAYVETGRPLAPPEAQTLQEHR CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHEEEEHHCCCCCCCCCHHHHHHHH AATEAAAGEFVQLQNRDVAGALIDFALQKNITQVIVGESLRSPAEELVRGSVINTLLRTT HHHHHHCCCCEEECCCCHHHHHHHHHHHHCHHHHHHCHHHCCHHHHHHHHHHHHHHHHCC SNIDVLIVGEAESSMVGPLTPVAAQPPFAVGCLLVGADSRRAHGCGRHKIYLGAAPGVGK CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHH TFAMLQEAHHLHASGIDVVCGVIETHGRAETAALIENLEVVPKRAIGYQGRTFLELDVEA HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHH VLRRRPAVVLVDELAHTNIAGAGNTKRFQDVEVLLGAGIDVVSTLNIQHLESLNTLVERT HHHCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH TGVKVRETLPDLVVEAADEVVLVDLPTGELTQRLREGKIYAQAKVEQALANFFRPENLSA CCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH LRELALREVADDCTTRKLEEAAHGPGGRVLVCINLRPNAEQLIRRGARIASRLSAPLVVA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEE HIGAHDDGPTARAVERLGELTRQLGGEFIERPAAANQVPEQIDALAHEQGVTLLVMGESR EECCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHCCCHHHHHHHHHHCCCEEEEECCHH RSRWEKLLHGCVIEQVVRRVRNLDVLIVGDLEHE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]