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The map label for this gene is 37520041

Identifier: 37520041

GI number: 37520041

Start: 505141

End: 505524

Strand: Direct

Name: 37520041

Synonym: glr0472

Alternate gene names: NA

Gene position: 505141-505524 (Clockwise)

Preceding gene: 37520040

Following gene: 37520043

Centisome position: 10.84

GC content: 58.07

Gene sequence:

>384_bases
ATGGACGACTGGCGCTTTCGTTTTTTGCTGGAATGCGTTCCCCATATTGTCTGGACGTCGAGTCCGGAAGGATATCTAGA
ATGCTGCAATCAGTACTGCCTGGAGTACACGGGTTCGAGCCTGGAGCAATTGCAGGGCTGCGGCTGGCAGCACGCTGTGC
ATCCGGAGGATTTGCCCCTGCTGTTGCGCCGCTCGCTGCAGTCGCTGCGCAGCGGTGAAGCTTATGAAGTGGAATATCGC
CTGAGGTGTTCCTCCGACGGCACCTACCGCTGGCACCTTGGTAAAGCGATGCCCATCCACGACGGCGACGGCCAGGTGTT
GCGCTGGTTTGGCACCTGCACGGACGTACACAGTTATAAACTGGCAGGCCAACGCGAGTTGTAA

Upstream 100 bases:

>100_bases
AACACTTGATAAGTGATCTATCGGCTTAACACATAAGCCCAACTGCGGTTCAGTGTGATAAGCAAACTGCTTCGATTTCC
CGTTGATCAGGAGAACTTCC

Downstream 100 bases:

>100_bases
GACTCAAGGGTGATTCTGGGGGGGCAGCAGGCATTCCGGGTCGCGCTCAGCCTGGATGCGCGTTCCTGCCCATTTGAGCT
TCTCGCGCAGGGTACGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDDWRFRFLLECVPHIVWTSSPEGYLECCNQYCLEYTGSSLEQLQGCGWQHAVHPEDLPLLLRRSLQSLRSGEAYEVEYR
LRCSSDGTYRWHLGKAMPIHDGDGQVLRWFGTCTDVHSYKLAGQREL

Sequences:

>Translated_127_residues
MDDWRFRFLLECVPHIVWTSSPEGYLECCNQYCLEYTGSSLEQLQGCGWQHAVHPEDLPLLLRRSLQSLRSGEAYEVEYR
LRCSSDGTYRWHLGKAMPIHDGDGQVLRWFGTCTDVHSYKLAGQREL
>Mature_127_residues
MDDWRFRFLLECVPHIVWTSSPEGYLECCNQYCLEYTGSSLEQLQGCGWQHAVHPEDLPLLLRRSLQSLRSGEAYEVEYR
LRCSSDGTYRWHLGKAMPIHDGDGQVLRWFGTCTDVHSYKLAGQREL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 14785; Mature: 14785

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDWRFRFLLECVPHIVWTSSPEGYLECCNQYCLEYTGSSLEQLQGCGWQHAVHPEDLPL
CCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHH
LLRRSLQSLRSGEAYEVEYRLRCSSDGTYRWHLGKAMPIHDGDGQVLRWFGTCTDVHSYK
HHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECCCCCCEECCCCCEEEEECCCCCCHHEE
LAGQREL
CCCCCCC
>Mature Secondary Structure
MDDWRFRFLLECVPHIVWTSSPEGYLECCNQYCLEYTGSSLEQLQGCGWQHAVHPEDLPL
CCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHH
LLRRSLQSLRSGEAYEVEYRLRCSSDGTYRWHLGKAMPIHDGDGQVLRWFGTCTDVHSYK
HHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECCCCCCEECCCCCEEEEECCCCCCHHEE
LAGQREL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]