Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37519921

Identifier: 37519921

GI number: 37519921

Start: 367920

End: 368240

Strand: Direct

Name: 37519921

Synonym: glr0352

Alternate gene names: NA

Gene position: 367920-368240 (Clockwise)

Preceding gene: 37519918

Following gene: 37519922

Centisome position: 7.9

GC content: 60.44

Gene sequence:

>321_bases
GTGAAAGATCGACTCGGCTTGTCTGTGCGCAACAGCCGGATCGCGCCGGTTGCAAGCAAGGCGCTCTTGCTCTTTTTTAC
CGGTCAGCCGCTCGAACTCACCGGGCTTCGCCACTCTGACGGACACGATTTTCGATCGACCACTACCGTACGTCTAAATA
TACCTCGGCAACTGCCGCAGACCGCTGCGCCTGGCGAAATCGCCCAGGCGCTCCATCTGACCGAAGGCACCGTCAAAAAC
CACGTTACCCGGATCCTCGCCCAGTTGGGCCTGCGCGATCGCACCCAGTTGGCGCTGTGGACCTACAAGCACCTCGGCTA
G

Upstream 100 bases:

>100_bases
CAAGAAACTGTTCTTCCACCCACCGGATCCTTGAGTTCATCGGCAAGCAGCGCGAAGCGCTCACCCCAACCGAGGGCATG
GCAAGATCGTAAAATCTCGG

Downstream 100 bases:

>100_bases
GCGGTAAGAGCAAGAAACGATTGAATGTCTATTGACATTACTTCTCAGCTAACGCTACTCTGCACTAGTCTGCGGGAGAC
AGTTGGAGAGCGGGCTTTGG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKDRLGLSVRNSRIAPVASKALLLFFTGQPLELTGLRHSDGHDFRSTTTVRLNIPRQLPQTAAPGEIAQALHLTEGTVKN
HVTRILAQLGLRDRTQLALWTYKHLG

Sequences:

>Translated_106_residues
MKDRLGLSVRNSRIAPVASKALLLFFTGQPLELTGLRHSDGHDFRSTTTVRLNIPRQLPQTAAPGEIAQALHLTEGTVKN
HVTRILAQLGLRDRTQLALWTYKHLG
>Mature_106_residues
MKDRLGLSVRNSRIAPVASKALLLFFTGQPLELTGLRHSDGHDFRSTTTVRLNIPRQLPQTAAPGEIAQALHLTEGTVKN
HVTRILAQLGLRDRTQLALWTYKHLG

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11774; Mature: 11774

Theoretical pI: Translated: 11.73; Mature: 11.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDRLGLSVRNSRIAPVASKALLLFFTGQPLELTGLRHSDGHDFRSTTTVRLNIPRQLPQ
CCCCCCCEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCC
TAAPGEIAQALHLTEGTVKNHVTRILAQLGLRDRTQLALWTYKHLG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKDRLGLSVRNSRIAPVASKALLLFFTGQPLELTGLRHSDGHDFRSTTTVRLNIPRQLPQ
CCCCCCCEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCC
TAAPGEIAQALHLTEGTVKNHVTRILAQLGLRDRTQLALWTYKHLG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA