| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ybcJ [C]
Identifier: 37519794
GI number: 37519794
Start: 229416
End: 229631
Strand: Reverse
Name: ybcJ [C]
Synonym: gsl0225
Alternate gene names: 37519794
Gene position: 229631-229416 (Counterclockwise)
Preceding gene: 37519795
Following gene: 37519791
Centisome position: 4.93
GC content: 57.41
Gene sequence:
>216_bases ATGAGCGAGGAGCGGACCTTTATCAAGCTCGACCAGTTTTTGAAACTGGTGGGCGCCGCCCAGACCGGCGGTCAGGCGAA GATCCTGATTCAAGAGGGTGAGGTACTCGTCAACGGCGCAGTCGAGACCCGCCGAGGCCGCAAACTGCTGGCAGGAGATC AAGTGACTCTTGCGCAGATGAACTATACGGTCCAACTGAATGAATCCAGCCCGTAG
Upstream 100 bases:
>100_bases GCGAAGTGATGAAGCAGCTCAAAGAGCGCCACGGCGGCCAGTACGACGGCAAGACCGCAAGCGAAGTCGTCCGCGCCGTC TTGCACTCGGAGGTCGGTAG
Downstream 100 bases:
>100_bases CCAAAATTGGTTTGAGGTTTGACACCTGACAGTTGGCTGGGCACGACAGTCTGTGGAGCGAGAGGTGGAACCCCCTTCGG GTTCCCCTCTCGCGCTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: S4 Domain Protein; S4 Domain Protein YaaA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQMNYTVQLNESSP
Sequences:
>Translated_71_residues MSEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQMNYTVQLNESSP >Mature_70_residues SEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQMNYTVQLNESSP
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7762; Mature: 7631
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQM CCCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEECCCCEEEEEE NYTVQLNESSP EEEEEEECCCC >Mature Secondary Structure SEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQM CCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEECCCCEEEEEE NYTVQLNESSP EEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA