| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is luxC [H]
Identifier: 34499774
GI number: 34499774
Start: 4659254
End: 4661659
Strand: Direct
Name: luxC [H]
Synonym: CV_4319
Alternate gene names: 34499774
Gene position: 4659254-4661659 (Clockwise)
Preceding gene: 34499773
Following gene: 34499775
Centisome position: 98.07
GC content: 74.11
Gene sequence:
>2406_bases ATGTATCTGATTGATGGAGAACTGCGCGCCGACCTCGAGCTCGACGCGGCATTGGCCGCGCTGCGCGGCCGCCTGCCCGA CGCGCTGGCTGCGGAGCCGGATGTCGACGCCGTGCTGTCCTGCGCCGAGCGTTTCGCCGACGCGCTGGCCGGCGCCGAGC GCCACCCGCTGCTGGACGAGCCCGGCCGCGCGCAACTGGCCGCCTTCTGCCGCCGCGAGGCGCTGCAGGCCAAGCTGGAG CGCGAGCTGGGCGAACGTCCGTTCTCGCTGCGCCGCCCCGACTACCGCGAGCCGCGCTTCGAGGCTTGGCGGCCGCTGGG GCTGGTGCTGCACGTGACGCCGTCCAACGCCGCGCTGCTGCCCTTCATGGCGGCGCTGGAAGGCCTGCTGGCCGGCAACG TCAACTGGCTGCGCCCCAGCTCCAGCGATCAGGGCCTCAGCTCCCGGCTGCTGGCCGAGCTGCTGCGCCATGACGCCAGC GGCAGGCTGGCCGCCCGCGTCGCCGTGCTGCCGGCGCCGAGCGACGCGCTGCCGCGGCTGATGGCCGACGCCGACGGCGT GTCCGCCTGGGGCGGCGACGCCGCGCTGTCCGCGATCCGCGCGCGGCTGCCGGCCGGCTGCCGCTGGATAGACTGGGGCC ATCGCGTCAGCTTCGCCTATCTCGACCCCGCCGCCGCCGCGGACGAGGCGCTGGACGCGCTGGCCGACGACATCTGCCGC TTCGACCAGCAAGCCTGCTCCAGCCCGCAGGCGCTGCTGGTGGACAGCGACGATCCGGCCGCGATCCACGAGATGGCGCG CCGGCTGGCCGCCGCGCTCGCCCGCCGCGCGCCGTTGTGGCCGGCGCTGACGCCGGACCTGCAGGAAGCCGCCGAGATCA GCGCCCGCATGGCCTTCCACAAGCTGGACCAGGCTTTCGCCGACGATCAGGGCCAGGTGCTGTCCGGCCAGGGCTGGCGG CTGGCCTGGAGCATGGAACAGGAACTGGCGCCGTCGCCGCTGTTCCGCACCGTGGAGCTGCGGCCGGCCCCGCGCGCGGC GCTGGCCCGCATCCTGCGCCCCTGGCGCACCCACCTGCAAAGCTGCGGCCTGATCGCGCCGCCGGCGCGCTTGCCGGAGC TGAGCCGCATGCTGCTGGCCGCCGGCGTCAGCCGCGTCGCGCCGGCCGGCCGCATGCACGACGGCTACCACGGCGAGCCG CACGACGGCGTCTACGCGCTGCAGCGGCTGTCGCGCCGGGTATCGGTGAGCCTGGACGCCGCCGCGCTGCCCGGCCACGC CCACCTGGACGCGCCGCCGGCCGCGCCCGCGGGCCTGGCCGCGCTGCCGGTGATGGACAAGGCCGCCTTCCAGAGCCAGG CCGCCAGCGACAAGGCGCAGCTGTTCTTCCGCAGCGGCGGCAGCAGCGGCGCGCCCAAGCTGGCCGGCTTCAGCTACCGC GACTACCACCGCCAGATGCGCGCCGCCGCCGACGGCCTGCTGGCCGCCGGCCTCAACCCGGCCACCGACCGCGCGATGAA CCTGCTCTACGGCGGCAAGCTGTACGGCGGCATGCTCAGCTTCTTCACCATCCTGGACCACATGGGCGTCGCGCAGTACC CGATGGGCGGCCCGTCCGACGACGACTTCGCCGAGATCGCCCACTTCATCGTCGAGCAGCAGATCAACACCCTGATCGGC ATGCCGGGCACGCTGCACAGGCTGTTCGAGCGCGAGAACAAGGTGCTGCGCCGCTACGGCGGCGTGCGCAAGGTGTTCTG CGGCGGCGAGCACATCAGCGACGGCCAGCGCGCCTACATCGGCAGCTTCGGCGTGGAGCTGATCCGTTCGGCGATGTACG GCTCGGTGGACGCCGGCCCGCTGGGCCACGCCTGCCCGCACTGCGCCGACGGCGAATTCCACCTGCTGGCCGAAACCCAG TGGCTGGAGGTGCTGGACATGGACAGCGACCTGCCGGCGGCGCGCGGCGCCGTCGGCCGCCTGGTGTTCACCTCGCGCGA GCGCGAGGCGCAGCGGGTAGAGCGCTACGACCTGGGCGACCTGGGCCAGTGGCTGGACGGCGGCTGCGCCTGCGGCCTGG CCGCGCCGCGTTTCCGCCTGACCGGCCGCCACGGCGCGCTGCTGCGGGTGGGCACCATCTTCGTCAATCCGGCCGCGCTG AGCGAGAAGATCGGCCTGCCCATGCAGTGGCTGGTCGACCACGCCGACAGCGGCGGCGACCGCATCCGGCTGCTGGCCGA CGGCGACCCGTGGGCGATACGCGGCCGCCTGCTGGAGGAGCCGATGCTGAATGAGGTGGTCGGCGGCGGCCTGCTGCAAC TGGAAGTGGCCGCCACCCCGGCCGCCGAATTCCGCCGCCATCCGCACAGCGGCAAGACCCCGCTGGTGCTGGACCTGAGA CGATGA
Upstream 100 bases:
>100_bases GGCCTGGCCACCGACTGGTTCGAGCTCTTGGGCCGCGCCGGCACCAGCAAGAGCCGCAGCTGCGCGATGGCCGCGTCCGA ACTGATCAAGGAGTCCTGAC
Downstream 100 bases:
>100_bases AACCCGGCCGGCGCCGCGGCGCCGGCATGTACACACATAATCATGAATCCGAAACTGATATCGCTGGTCGAACACGCCCG CAACCATTCGCCGCACTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MYLIDGELRADLELDAALAALRGRLPDALAAEPDVDAVLSCAERFADALAGAERHPLLDEPGRAQLAAFCRREALQAKLE RELGERPFSLRRPDYREPRFEAWRPLGLVLHVTPSNAALLPFMAALEGLLAGNVNWLRPSSSDQGLSSRLLAELLRHDAS GRLAARVAVLPAPSDALPRLMADADGVSAWGGDAALSAIRARLPAGCRWIDWGHRVSFAYLDPAAAADEALDALADDICR FDQQACSSPQALLVDSDDPAAIHEMARRLAAALARRAPLWPALTPDLQEAAEISARMAFHKLDQAFADDQGQVLSGQGWR LAWSMEQELAPSPLFRTVELRPAPRAALARILRPWRTHLQSCGLIAPPARLPELSRMLLAAGVSRVAPAGRMHDGYHGEP HDGVYALQRLSRRVSVSLDAAALPGHAHLDAPPAAPAGLAALPVMDKAAFQSQAASDKAQLFFRSGGSSGAPKLAGFSYR DYHRQMRAAADGLLAAGLNPATDRAMNLLYGGKLYGGMLSFFTILDHMGVAQYPMGGPSDDDFAEIAHFIVEQQINTLIG MPGTLHRLFERENKVLRRYGGVRKVFCGGEHISDGQRAYIGSFGVELIRSAMYGSVDAGPLGHACPHCADGEFHLLAETQ WLEVLDMDSDLPAARGAVGRLVFTSREREAQRVERYDLGDLGQWLDGGCACGLAAPRFRLTGRHGALLRVGTIFVNPAAL SEKIGLPMQWLVDHADSGGDRIRLLADGDPWAIRGRLLEEPMLNEVVGGGLLQLEVAATPAAEFRRHPHSGKTPLVLDLR R
Sequences:
>Translated_801_residues MYLIDGELRADLELDAALAALRGRLPDALAAEPDVDAVLSCAERFADALAGAERHPLLDEPGRAQLAAFCRREALQAKLE RELGERPFSLRRPDYREPRFEAWRPLGLVLHVTPSNAALLPFMAALEGLLAGNVNWLRPSSSDQGLSSRLLAELLRHDAS GRLAARVAVLPAPSDALPRLMADADGVSAWGGDAALSAIRARLPAGCRWIDWGHRVSFAYLDPAAAADEALDALADDICR FDQQACSSPQALLVDSDDPAAIHEMARRLAAALARRAPLWPALTPDLQEAAEISARMAFHKLDQAFADDQGQVLSGQGWR LAWSMEQELAPSPLFRTVELRPAPRAALARILRPWRTHLQSCGLIAPPARLPELSRMLLAAGVSRVAPAGRMHDGYHGEP HDGVYALQRLSRRVSVSLDAAALPGHAHLDAPPAAPAGLAALPVMDKAAFQSQAASDKAQLFFRSGGSSGAPKLAGFSYR DYHRQMRAAADGLLAAGLNPATDRAMNLLYGGKLYGGMLSFFTILDHMGVAQYPMGGPSDDDFAEIAHFIVEQQINTLIG MPGTLHRLFERENKVLRRYGGVRKVFCGGEHISDGQRAYIGSFGVELIRSAMYGSVDAGPLGHACPHCADGEFHLLAETQ WLEVLDMDSDLPAARGAVGRLVFTSREREAQRVERYDLGDLGQWLDGGCACGLAAPRFRLTGRHGALLRVGTIFVNPAAL SEKIGLPMQWLVDHADSGGDRIRLLADGDPWAIRGRLLEEPMLNEVVGGGLLQLEVAATPAAEFRRHPHSGKTPLVLDLR R >Mature_801_residues MYLIDGELRADLELDAALAALRGRLPDALAAEPDVDAVLSCAERFADALAGAERHPLLDEPGRAQLAAFCRREALQAKLE RELGERPFSLRRPDYREPRFEAWRPLGLVLHVTPSNAALLPFMAALEGLLAGNVNWLRPSSSDQGLSSRLLAELLRHDAS GRLAARVAVLPAPSDALPRLMADADGVSAWGGDAALSAIRARLPAGCRWIDWGHRVSFAYLDPAAAADEALDALADDICR FDQQACSSPQALLVDSDDPAAIHEMARRLAAALARRAPLWPALTPDLQEAAEISARMAFHKLDQAFADDQGQVLSGQGWR LAWSMEQELAPSPLFRTVELRPAPRAALARILRPWRTHLQSCGLIAPPARLPELSRMLLAAGVSRVAPAGRMHDGYHGEP HDGVYALQRLSRRVSVSLDAAALPGHAHLDAPPAAPAGLAALPVMDKAAFQSQAASDKAQLFFRSGGSSGAPKLAGFSYR DYHRQMRAAADGLLAAGLNPATDRAMNLLYGGKLYGGMLSFFTILDHMGVAQYPMGGPSDDDFAEIAHFIVEQQINTLIG MPGTLHRLFERENKVLRRYGGVRKVFCGGEHISDGQRAYIGSFGVELIRSAMYGSVDAGPLGHACPHCADGEFHLLAETQ WLEVLDMDSDLPAARGAVGRLVFTSREREAQRVERYDLGDLGQWLDGGCACGLAAPRFRLTGRHGALLRVGTIFVNPAAL SEKIGLPMQWLVDHADSGGDRIRLLADGDPWAIRGRLLEEPMLNEVVGGGLLQLEVAATPAAEFRRHPHSGKTPLVLDLR R
Specific function: LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the luxC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016162 - InterPro: IPR008670 [H]
Pfam domain/function: PF05893 LuxC [H]
EC number: =1.2.1.50 [H]
Molecular weight: Translated: 86557; Mature: 86557
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLIDGELRADLELDAALAALRGRLPDALAAEPDVDAVLSCAERFADALAGAERHPLLDE CEEECCCCCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PGRAQLAAFCRREALQAKLERELGERPFSLRRPDYREPRFEAWRPLGLVLHVTPSNAALL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHH PFMAALEGLLAGNVNWLRPSSSDQGLSSRLLAELLRHDASGRLAARVAVLPAPSDALPRL HHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHH MADADGVSAWGGDAALSAIRARLPAGCRWIDWGHRVSFAYLDPAAAADEALDALADDICR HHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHH FDQQACSSPQALLVDSDDPAAIHEMARRLAAALARRAPLWPALTPDLQEAAEISARMAFH HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH KLDQAFADDQGQVLSGQGWRLAWSMEQELAPSPLFRTVELRPAPRAALARILRPWRTHLQ HHHHHHCCCCCCEECCCCEEEEECCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH SCGLIAPPARLPELSRMLLAAGVSRVAPAGRMHDGYHGEPHDGVYALQRLSRRVSVSLDA HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECH AALPGHAHLDAPPAAPAGLAALPVMDKAAFQSQAASDKAQLFFRSGGSSGAPKLAGFSYR HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCHH DYHRQMRAAADGLLAAGLNPATDRAMNLLYGGKLYGGMLSFFTILDHMGVAQYPMGGPSD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC DDFAEIAHFIVEQQINTLIGMPGTLHRLFERENKVLRRYGGVRKVFCGGEHISDGQRAYI CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH GSFGVELIRSAMYGSVDAGPLGHACPHCADGEFHLLAETQWLEVLDMDSDLPAARGAVGR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCHHHCCHHH LVFTSREREAQRVERYDLGDLGQWLDGGCACGLAAPRFRLTGRHGALLRVGTIFVNPAAL HEEECCHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCEEECCCCCCEEEEEEEEECHHHH SEKIGLPMQWLVDHADSGGDRIRLLADGDPWAIRGRLLEEPMLNEVVGGGLLQLEVAATP HHHHCCCHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHCCHHHHHHHCCCEEEEEEECCC AAEFRRHPHSGKTPLVLDLRR HHHHHCCCCCCCCCEEEEECC >Mature Secondary Structure MYLIDGELRADLELDAALAALRGRLPDALAAEPDVDAVLSCAERFADALAGAERHPLLDE CEEECCCCCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PGRAQLAAFCRREALQAKLERELGERPFSLRRPDYREPRFEAWRPLGLVLHVTPSNAALL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHH PFMAALEGLLAGNVNWLRPSSSDQGLSSRLLAELLRHDASGRLAARVAVLPAPSDALPRL HHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHH MADADGVSAWGGDAALSAIRARLPAGCRWIDWGHRVSFAYLDPAAAADEALDALADDICR HHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHH FDQQACSSPQALLVDSDDPAAIHEMARRLAAALARRAPLWPALTPDLQEAAEISARMAFH HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH KLDQAFADDQGQVLSGQGWRLAWSMEQELAPSPLFRTVELRPAPRAALARILRPWRTHLQ HHHHHHCCCCCCEECCCCEEEEECCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH SCGLIAPPARLPELSRMLLAAGVSRVAPAGRMHDGYHGEPHDGVYALQRLSRRVSVSLDA HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECH AALPGHAHLDAPPAAPAGLAALPVMDKAAFQSQAASDKAQLFFRSGGSSGAPKLAGFSYR HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCHH DYHRQMRAAADGLLAAGLNPATDRAMNLLYGGKLYGGMLSFFTILDHMGVAQYPMGGPSD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC DDFAEIAHFIVEQQINTLIGMPGTLHRLFERENKVLRRYGGVRKVFCGGEHISDGQRAYI CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH GSFGVELIRSAMYGSVDAGPLGHACPHCADGEFHLLAETQWLEVLDMDSDLPAARGAVGR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCHHHCCHHH LVFTSREREAQRVERYDLGDLGQWLDGGCACGLAAPRFRLTGRHGALLRVGTIFVNPAAL HEEECCHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCEEECCCCCCEEEEEEEEECHHHH SEKIGLPMQWLVDHADSGGDRIRLLADGDPWAIRGRLLEEPMLNEVVGGGLLQLEVAATP HHHHCCCHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHCCHHHHHHHCCCEEEEEEECCC AAEFRRHPHSGKTPLVLDLRR HHHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3697093 [H]