| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499763
Identifier: 34499763
GI number: 34499763
Start: 4650567
End: 4651298
Strand: Reverse
Name: 34499763
Synonym: CV_4308
Alternate gene names: NA
Gene position: 4651298-4650567 (Counterclockwise)
Preceding gene: 34499764
Following gene: 34499762
Centisome position: 97.9
GC content: 66.8
Gene sequence:
>732_bases ATGGGAGCTGGCCGCATGCGGCAACGCTTGAAGTTCGGCGCGCTGCTGGCGGCCGCTTGCTTTTACCCGGCGCATGGGAT GGCCGATGGCCTGGAGCGGGTGCGCATCTACACCGACGACGATCCGCCCTACGTGATGGTGAGCCCGGACGGACAGGTGA TGGGTGGCACCACGGTGGAGAAGGTGACGCGCGTGCTGCGCGCGCTGGGCCTGCCGTTCAGCGCGATGCAGGCCGCGCCG TGGGCGCGCGCCTACCAGCAGGCCCGCACCCAGCCCTATGCGATGGTGTTCCCCATCGCCAGGACCCGCGAACGGCAGAA GTACCTGGATTTCACCTTCAAGATTCTCGACGCCGACATTTATTTCTACCGTTTGGCCGCGCGCGCGGATATCCAGCCGC GCACGCTGGAAGAGGCGCGCAAGTACAGCGTCTGCGTGGTGCTGGACGATTATCGGCATGAATTCCTGCTGGAGCAGGGT TTCGCCCGGCTGGAAGTCTCGCCCGATTCCACGCTCAATGTCAGGAAGCTTGCGGCAGGCCGCTGCGACCTGCTGCCGTC CACCGAAAGCGGCATCGCCGGCAAGCTGAAGGCGCTGGGGCTGGAGCGCGGTCTGGTGGCGCGCGGCATCCGGCTGGACA AGCTGGACAGCGGGCTGTACGCCGCTTTCAACAAGGACACGCCGCCAGAAGTGATCGCCCGTTTCCGGGCCGCCGCCGCC GAGGTGCCCTGA
Upstream 100 bases:
>100_bases ACCCACTGGCAGGTAGGCCGCGCCGACATCGACCGCCTGTTGGAGGTGATGCAGCGCGTGCTCTGCGACTGAACGGGCTA TAACCATGAGGTAGAAACCG
Downstream 100 bases:
>100_bases GATGCGCCATCTCTCGCTGTTGCTGTGCTGCCTGCTGGCCTGGCCCGCCAGGGCCGAGACGCTGGTGGAGATTCCCACCC GCCCCGGCGTCGCGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MGAGRMRQRLKFGALLAAACFYPAHGMADGLERVRIYTDDDPPYVMVSPDGQVMGGTTVEKVTRVLRALGLPFSAMQAAP WARAYQQARTQPYAMVFPIARTRERQKYLDFTFKILDADIYFYRLAARADIQPRTLEEARKYSVCVVLDDYRHEFLLEQG FARLEVSPDSTLNVRKLAAGRCDLLPSTESGIAGKLKALGLERGLVARGIRLDKLDSGLYAAFNKDTPPEVIARFRAAAA EVP
Sequences:
>Translated_243_residues MGAGRMRQRLKFGALLAAACFYPAHGMADGLERVRIYTDDDPPYVMVSPDGQVMGGTTVEKVTRVLRALGLPFSAMQAAP WARAYQQARTQPYAMVFPIARTRERQKYLDFTFKILDADIYFYRLAARADIQPRTLEEARKYSVCVVLDDYRHEFLLEQG FARLEVSPDSTLNVRKLAAGRCDLLPSTESGIAGKLKALGLERGLVARGIRLDKLDSGLYAAFNKDTPPEVIARFRAAAA EVP >Mature_242_residues GAGRMRQRLKFGALLAAACFYPAHGMADGLERVRIYTDDDPPYVMVSPDGQVMGGTTVEKVTRVLRALGLPFSAMQAAPW ARAYQQARTQPYAMVFPIARTRERQKYLDFTFKILDADIYFYRLAARADIQPRTLEEARKYSVCVVLDDYRHEFLLEQGF ARLEVSPDSTLNVRKLAAGRCDLLPSTESGIAGKLKALGLERGLVARGIRLDKLDSGLYAAFNKDTPPEVIARFRAAAAE VP
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27068; Mature: 26936
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGRMRQRLKFGALLAAACFYPAHGMADGLERVRIYTDDDPPYVMVSPDGQVMGGTTVE CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCEEEECCCCCEECCCHHH KVTRVLRALGLPFSAMQAAPWARAYQQARTQPYAMVFPIARTRERQKYLDFTFKILDADI HHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHE YFYRLAARADIQPRTLEEARKYSVCVVLDDYRHEFLLEQGFARLEVSPDSTLNVRKLAAG EEEEEECCCCCCCHHHHHHHHEEEEEEECCHHHHHHHHCCCEEEEECCCCCCCHHHHHCC RCDLLPSTESGIAGKLKALGLERGLVARGIRLDKLDSGLYAAFNKDTPPEVIARFRAAAA CCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHC EVP CCC >Mature Secondary Structure GAGRMRQRLKFGALLAAACFYPAHGMADGLERVRIYTDDDPPYVMVSPDGQVMGGTTVE CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCEEEECCCCCEECCCHHH KVTRVLRALGLPFSAMQAAPWARAYQQARTQPYAMVFPIARTRERQKYLDFTFKILDADI HHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHE YFYRLAARADIQPRTLEEARKYSVCVVLDDYRHEFLLEQGFARLEVSPDSTLNVRKLAAG EEEEEECCCCCCCHHHHHHHHEEEEEEECCHHHHHHHHCCCEEEEECCCCCCCHHHHHCC RCDLLPSTESGIAGKLKALGLERGLVARGIRLDKLDSGLYAAFNKDTPPEVIARFRAAAA CCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHC EVP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA