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The map label for this gene is ydaA [C]

Identifier: 34499755

GI number: 34499755

Start: 4640837

End: 4641313

Strand: Direct

Name: ydaA [C]

Synonym: CV_4300

Alternate gene names: 34499755

Gene position: 4640837-4641313 (Clockwise)

Preceding gene: 34499753

Following gene: 34499757

Centisome position: 97.68

GC content: 65.83

Gene sequence:

>477_bases
ATGTATCGTCACATCATCGCCGCGATAGACGGCAGCAACAATTCCGACAAAGCCCTGCACGAGGCCATACGCGTCGCCAA
GTTCACCGAAGCGCGCCTGACCCTGATCCATGTCGCCAGCCTGCGCGATCTGGCCGTGGACAGCCTGGGCGTCTACGCCG
GCGACCCCGGCTACGACCTGGCGCTGCAGCAGGGCCAGGAAGCGCTGGCGCGCGCGCAGGAGATCGCCCGCAACGCCGGC
CTGAGCAATGTGGTCAGCCATCTGGAAAAAAGCTGGGAAGGCGGCCATGACCTGGCCGATCTGCTGATAGGCTACGCCAG
CGCGCAGCAGGCCGATCTGATCGTGCTCGGCACTCATGGCCGCAGCGGCCTGGCCCATCTGTTCCTGGGCAGCTTCGCCG
AGGACATCCTGCGCCGCAGCCAGTGTCCGCTGCTGGTGGTGCGCAGCCAGGAAGACGACGACATCCGCGTCGAGTAA

Upstream 100 bases:

>100_bases
CCCTGGATCAACACCCGCGCTCGCCCGGCGAGACATCGCCGCCGCCATCAGAGTATGCTGAAGGCATCCCACCAAGCGGT
AGTTCGCGAAGGAGCAGCCC

Downstream 100 bases:

>100_bases
GCCCTGGCCCGCAACACGCCGGCCCGCCTCGCGCGGGCCTTGCCGTTTCTCAGCGCCGCCCGGCGTGGACGAAGAACTCG
CGGTTGCCGTCGCCGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MYRHIIAAIDGSNNSDKALHEAIRVAKFTEARLTLIHVASLRDLAVDSLGVYAGDPGYDLALQQGQEALARAQEIARNAG
LSNVVSHLEKSWEGGHDLADLLIGYASAQQADLIVLGTHGRSGLAHLFLGSFAEDILRRSQCPLLVVRSQEDDDIRVE

Sequences:

>Translated_158_residues
MYRHIIAAIDGSNNSDKALHEAIRVAKFTEARLTLIHVASLRDLAVDSLGVYAGDPGYDLALQQGQEALARAQEIARNAG
LSNVVSHLEKSWEGGHDLADLLIGYASAQQADLIVLGTHGRSGLAHLFLGSFAEDILRRSQCPLLVVRSQEDDDIRVE
>Mature_158_residues
MYRHIIAAIDGSNNSDKALHEAIRVAKFTEARLTLIHVASLRDLAVDSLGVYAGDPGYDLALQQGQEALARAQEIARNAG
LSNVVSHLEKSWEGGHDLADLLIGYASAQQADLIVLGTHGRSGLAHLFLGSFAEDILRRSQCPLLVVRSQEDDDIRVE

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 17124; Mature: 17124

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRHIIAAIDGSNNSDKALHEAIRVAKFTEARLTLIHVASLRDLAVDSLGVYAGDPGYDL
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH
ALQQGQEALARAQEIARNAGLSNVVSHLEKSWEGGHDLADLLIGYASAQQADLIVLGTHG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCC
RSGLAHLFLGSFAEDILRRSQCPLLVVRSQEDDDIRVE
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MYRHIIAAIDGSNNSDKALHEAIRVAKFTEARLTLIHVASLRDLAVDSLGVYAGDPGYDL
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH
ALQQGQEALARAQEIARNAGLSNVVSHLEKSWEGGHDLADLLIGYASAQQADLIVLGTHG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCC
RSGLAHLFLGSFAEDILRRSQCPLLVVRSQEDDDIRVE
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]