| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499751
Identifier: 34499751
GI number: 34499751
Start: 4635694
End: 4637088
Strand: Direct
Name: 34499751
Synonym: CV_4296
Alternate gene names: NA
Gene position: 4635694-4637088 (Clockwise)
Preceding gene: 34499750
Following gene: 34499752
Centisome position: 97.57
GC content: 69.96
Gene sequence:
>1395_bases ATGACCACCGCCTCCCATCCGAAGTACGACCAGCATTACGCCGACGGCAAGGCCCGCCGCCGCGCCTGCCCCCGCTCCAG CCAGGCCGAACTCCACCTGGCACCGGATCGGGACGTGGTGGCGCTGGTGGAGTCCACCTCCCAAGGCCGGGTGCCGGCGC TGGCGCCGCTGCGCTACGCGCGCATGCACGCGTCGCCGTTCGCCTTCTTCCGCGGCATGGCGATGATCCAGGCCGCCGAC CTCGCCGCCGGGCCGGACAGCGGGCTCAAGATGCAGATCTGCGGCGACGCCCACCTGATGAACTTCGGCTTTTTCGCGTC GCCGGAGCGGCAACTGGTGTTCGACATCAACGATTTCGACGAAACCCATCCCGGTCCCTGGGAATGGGACATCAAGCGGC TGGCGGTCAGCCTGGTGCTGGCCGGCCGCAGCCGCGGCTTCGACGCGCCGGCCGCGCGCGAAATCGTGCTGCGCCTGGCC GGCACCTACCGCCGCCGCATCCGCGCCTTCTCGCAGATGAGCCAATTGGACTTGTGGTACTGCCGCGTCGGCTTCGAGCA GTTGTTGTCCCAGGCCACCGACGAAGGCATGCGCCAGCAGCTGAACAAAGTGGCCGGCAAGGCGCGCAATCAGACCCAGG AGCGGCTGCTGCCCAAGATGGCCGACCTGGAGGGCGGCGGCCTGCGGCTGCGCGACAACCCGCCGGTGATCTTCCACCTG GACGACCACAACAGCCCGCTCGCCGCCTGCGACGACTGGCTGGGCGAGGACAGCCGCGCCAAGATCCAGCGCATGCTGGA CAGCTACATCGACACGCTGAAGGAAGACCGGCGCGAGCTGCTGCAGCGCTTCCGGCTGGTGGACGCGGCGTTCAAGGTGG TGGGGGTCGGCAGCGTCGGCACCCGCTGCCTGGCGCTGCTGCTGCAGGACGACTACGACCAGCCGCTGTTCCTGCAACTG AAAGAGGCGCGGCCGTCGGTGCTGGAGTCCTTCACCCAGCCATGCGTGCACGGCAACCAGGGCAAGCGCGTGGTGTTCGG CCAGCGCCTGATGCAGGCCACCAGCGACCTGTTCCTGGGCTGGACCCAGGGCGCGGACGGCCGCCACTTCTACATGCGCC AGCTGCGCGACATGAAGGCCGCCCCGGCGCTGGAGGCCTTCGCCACCGCCGAAGAGCTGGCCAGCTACGGCCAGGCCTGC GGCTGGACGCTGGCGCGCGCCCACGCCAAGTCCGGCGGCTGCGCGGCCGAGATCGCAGGCTACCTGGGCGATTCCGACAA GTTCGACCAGATGCTGGCCGACTACGCCCAGGCCTACGCCGACCAGGTGGAAGCCGACTACCGGCTGTTCGACGCGGCGG TGCGCGGCGGACGCCTGCCAGCCGCCGCGGCATGA
Upstream 100 bases:
>100_bases GAATAAACGTCGCGGGCCCGCACCTCGCCGAATGCTGTCGAATGCCCATCGCGCGCGCACGCGGTTACACTGACGGCATA CGCTCCCCACGGATACGCCG
Downstream 100 bases:
>100_bases CGTCCGGGTTAGGGAAAATTGCGATGTTGATATTTGCGTCCTGAACTAGACTGTAACAACAGAAACGCATAATCAGCCGG CGCCGGACCGCTCCCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTTASHPKYDQHYADGKARRRACPRSSQAELHLAPDRDVVALVESTSQGRVPALAPLRYARMHASPFAFFRGMAMIQAAD LAAGPDSGLKMQICGDAHLMNFGFFASPERQLVFDINDFDETHPGPWEWDIKRLAVSLVLAGRSRGFDAPAAREIVLRLA GTYRRRIRAFSQMSQLDLWYCRVGFEQLLSQATDEGMRQQLNKVAGKARNQTQERLLPKMADLEGGGLRLRDNPPVIFHL DDHNSPLAACDDWLGEDSRAKIQRMLDSYIDTLKEDRRELLQRFRLVDAAFKVVGVGSVGTRCLALLLQDDYDQPLFLQL KEARPSVLESFTQPCVHGNQGKRVVFGQRLMQATSDLFLGWTQGADGRHFYMRQLRDMKAAPALEAFATAEELASYGQAC GWTLARAHAKSGGCAAEIAGYLGDSDKFDQMLADYAQAYADQVEADYRLFDAAVRGGRLPAAAA
Sequences:
>Translated_464_residues MTTASHPKYDQHYADGKARRRACPRSSQAELHLAPDRDVVALVESTSQGRVPALAPLRYARMHASPFAFFRGMAMIQAAD LAAGPDSGLKMQICGDAHLMNFGFFASPERQLVFDINDFDETHPGPWEWDIKRLAVSLVLAGRSRGFDAPAAREIVLRLA GTYRRRIRAFSQMSQLDLWYCRVGFEQLLSQATDEGMRQQLNKVAGKARNQTQERLLPKMADLEGGGLRLRDNPPVIFHL DDHNSPLAACDDWLGEDSRAKIQRMLDSYIDTLKEDRRELLQRFRLVDAAFKVVGVGSVGTRCLALLLQDDYDQPLFLQL KEARPSVLESFTQPCVHGNQGKRVVFGQRLMQATSDLFLGWTQGADGRHFYMRQLRDMKAAPALEAFATAEELASYGQAC GWTLARAHAKSGGCAAEIAGYLGDSDKFDQMLADYAQAYADQVEADYRLFDAAVRGGRLPAAAA >Mature_463_residues TTASHPKYDQHYADGKARRRACPRSSQAELHLAPDRDVVALVESTSQGRVPALAPLRYARMHASPFAFFRGMAMIQAADL AAGPDSGLKMQICGDAHLMNFGFFASPERQLVFDINDFDETHPGPWEWDIKRLAVSLVLAGRSRGFDAPAAREIVLRLAG TYRRRIRAFSQMSQLDLWYCRVGFEQLLSQATDEGMRQQLNKVAGKARNQTQERLLPKMADLEGGGLRLRDNPPVIFHLD DHNSPLAACDDWLGEDSRAKIQRMLDSYIDTLKEDRRELLQRFRLVDAAFKVVGVGSVGTRCLALLLQDDYDQPLFLQLK EARPSVLESFTQPCVHGNQGKRVVFGQRLMQATSDLFLGWTQGADGRHFYMRQLRDMKAAPALEAFATAEELASYGQACG WTLARAHAKSGGCAAEIAGYLGDSDKFDQMLADYAQAYADQVEADYRLFDAAVRGGRLPAAAA
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51608; Mature: 51477
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTASHPKYDQHYADGKARRRACPRSSQAELHLAPDRDVVALVESTSQGRVPALAPLRYA CCCCCCCCCHHHHCCCHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHH RMHASPFAFFRGMAMIQAADLAAGPDSGLKMQICGDAHLMNFGFFASPERQLVFDINDFD HHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCC ETHPGPWEWDIKRLAVSLVLAGRSRGFDAPAAREIVLRLAGTYRRRIRAFSQMSQLDLWY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRVGFEQLLSQATDEGMRQQLNKVAGKARNQTQERLLPKMADLEGGGLRLRDNPPVIFHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEECCCCEEEEE DDHNSPLAACDDWLGEDSRAKIQRMLDSYIDTLKEDRRELLQRFRLVDAAFKVVGVGSVG CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TRCLALLLQDDYDQPLFLQLKEARPSVLESFTQPCVHGNQGKRVVFGQRLMQATSDLFLG HHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHEEE WTQGADGRHFYMRQLRDMKAAPALEAFATAEELASYGQACGWTLARAHAKSGGCAAEIAG ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLGDSDKFDQMLADYAQAYADQVEADYRLFDAAVRGGRLPAAAA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTASHPKYDQHYADGKARRRACPRSSQAELHLAPDRDVVALVESTSQGRVPALAPLRYA CCCCCCCCHHHHCCCHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHH RMHASPFAFFRGMAMIQAADLAAGPDSGLKMQICGDAHLMNFGFFASPERQLVFDINDFD HHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCC ETHPGPWEWDIKRLAVSLVLAGRSRGFDAPAAREIVLRLAGTYRRRIRAFSQMSQLDLWY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRVGFEQLLSQATDEGMRQQLNKVAGKARNQTQERLLPKMADLEGGGLRLRDNPPVIFHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEECCCCEEEEE DDHNSPLAACDDWLGEDSRAKIQRMLDSYIDTLKEDRRELLQRFRLVDAAFKVVGVGSVG CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TRCLALLLQDDYDQPLFLQLKEARPSVLESFTQPCVHGNQGKRVVFGQRLMQATSDLFLG HHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHEEE WTQGADGRHFYMRQLRDMKAAPALEAFATAEELASYGQACGWTLARAHAKSGGCAAEIAG ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLGDSDKFDQMLADYAQAYADQVEADYRLFDAAVRGGRLPAAAA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA