| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34499750
Identifier: 34499750
GI number: 34499750
Start: 4635059
End: 4635427
Strand: Direct
Name: 34499750
Synonym: CV_4295
Alternate gene names: NA
Gene position: 4635059-4635427 (Clockwise)
Preceding gene: 34499749
Following gene: 34499751
Centisome position: 97.56
GC content: 68.83
Gene sequence:
>369_bases ATGCCTAAGCCGATGTCCCTACTCCGCGCCGTTCTCCCCCTCGCCATCTCCTTGTCCCTGCTGGCCTGCGCCACGCCGCT GCGCGCCGCGCCCGCGCTCAGCCTGAACAGCCCCCGTCCGCCGCAGCAGGTGGCCGACTGCCTGCAGCAAGGCCTGCAGA AGCTGCACATCCCCGACGATTTCGTCGAACGCCGCGAAGAAAGCGACGGCAGCCGCAGCCTGGCGCTGCGCAATCCGGTC AGCGACGCCTCCGGCACCCGGGTGGACATCCTGCCGCGAGGCGAAGGCAGCCGGCTGGAAGTCCGGTTGAACGGCATGCC CTTGAGTCCCGCCTGGAAGAAGCAGATCCACGGCTGCACCCGCAAATGA
Upstream 100 bases:
>100_bases GGCGACCGCTTCGCGTAACATCGCTTAACATCTTGCCGCCGCGGCCGCCGGAACCCGCGGCGGCCCGCGGCGCACCAAAA AGGCATTGTTTCACCAACCG
Downstream 100 bases:
>100_bases CTGTGGATAAATCTGAAATTGCGCGAATGACTGTGGGCAAACTGAATATCCCGGGATAAGACTGTGGACAACTTGCCGAA AAACGCCTTTTCCTTTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MPKPMSLLRAVLPLAISLSLLACATPLRAAPALSLNSPRPPQQVADCLQQGLQKLHIPDDFVERREESDGSRSLALRNPV SDASGTRVDILPRGEGSRLEVRLNGMPLSPAWKKQIHGCTRK
Sequences:
>Translated_122_residues MPKPMSLLRAVLPLAISLSLLACATPLRAAPALSLNSPRPPQQVADCLQQGLQKLHIPDDFVERREESDGSRSLALRNPV SDASGTRVDILPRGEGSRLEVRLNGMPLSPAWKKQIHGCTRK >Mature_121_residues PKPMSLLRAVLPLAISLSLLACATPLRAAPALSLNSPRPPQQVADCLQQGLQKLHIPDDFVERREESDGSRSLALRNPVS DASGTRVDILPRGEGSRLEVRLNGMPLSPAWKKQIHGCTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13281; Mature: 13149
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPMSLLRAVLPLAISLSLLACATPLRAAPALSLNSPRPPQQVADCLQQGLQKLHIPDD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH FVERREESDGSRSLALRNPVSDASGTRVDILPRGEGSRLEVRLNGMPLSPAWKKQIHGCT HHHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCC RK CC >Mature Secondary Structure PKPMSLLRAVLPLAISLSLLACATPLRAAPALSLNSPRPPQQVADCLQQGLQKLHIPDD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH FVERREESDGSRSLALRNPVSDASGTRVDILPRGEGSRLEVRLNGMPLSPAWKKQIHGCT HHHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCC RK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA