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The map label for this gene is ygaY [H]

Identifier: 34499747

GI number: 34499747

Start: 4631885

End: 4633057

Strand: Reverse

Name: ygaY [H]

Synonym: CV_4292

Alternate gene names: 34499747

Gene position: 4633057-4631885 (Counterclockwise)

Preceding gene: 34499748

Following gene: 34499746

Centisome position: 97.52

GC content: 62.83

Gene sequence:

>1173_bases
ATGCGTTCGCGGACATTGTTTCTATTCGCCGGAATCTGCGCGTTCTCTGTCGCCAACATCTATTACAACCAGCCCTTGCT
GGTGTTGTTCGCGCAGACGTTCGGGGCCGATGTCGGCCAAGCCAGCTCCATCGCGATGACCGTGCAGTTGGCCTATGCGG
TGGGACTGGTGTTGTTTGTGCCCCTGGGGGACTGGGTTAGCCGTCGCAAATTGATGATTTCGCTGCTGTGCGTCAATGCG
GCCGGTTCAATCTGGGCGGCGTCCTCCTCCAGTTTGCCCATGCTGATCGCCGCTCATGTCGTCATCGGCATGACGTCAGT
CGGCGCGCAAATCATCATACCGGCCGTATCTTTGATGATGTCTCCCGAGCAGCGAGGCCGCGCGGTCGGCACGGTGATGA
GCGGCTTGCTGGCCGGTATTTTGCTGGCCAGAACGCTATCCGGCTTGGTGGGCGGCTATGCCGGCTGGCGAACGATGTAT
GCCCTTGCCGCAGGCATCGATATCGGTTTGATCGCGGTGGTGGCGGCGACTTTGCCGGCGAGCGGCGGATTGGCGCGTTC
ATCCTATGGCCAATTGCTGCGCTCCCTGGGACAGCTGTTGGCGACGGAGCGGGAACTGCGGCTTGCCTGTCTGTGCGGCG
CTTTGATGTTTGGCGCCTTCAGCGCGTTATGGGGCGCGTTGGCTTATCTGCTGTCCCGCCCGCCCTATCGCTTTCATAGC
GATGCCGTCGGTTTGTTCGGCTTGGTCGGCATCGCCGGCATTTTCGCGTCCCCGTTCATTGGCCGGCTGGCGGACCGCCT
GGGCGCGCGAGCGGTTGTGTTGCTGGGCGCGATAGCCGCCGCCTGCGCCTTTGCCCTGATTGGCAGCAGCGCATCCCTGT
TGCCGGCGCTGTTGTTGGGAATCGTCATTCTGGACTTGGGCGGCCGCGCCGGCTTGGTGGGCAATCAATTGCGCGCCTTG
TCCTTGTCCGACAGCGCGCGCAGCCGTCTGAACACGGTGTTCATGGCGTGCTATTTCCTGGGCGGCGCCCTCGGCACCCG
AGCCGGGGCCGCGCTGGCCGGAGAGTACGGATGGAGCGGCATCGCGGCGTTGGGCTTGGCTGCGTCGACCGTCGTGATTG
TTTTAAATGCGAATGCCATCGTGGCGCTGCGCCTGATCTGGAGAGTTTCATGA

Upstream 100 bases:

>100_bases
CCAGAAGTGGGCCGAAATCGCAATGACTTGATTGCCGGATTAATCGGCACGGGCATGCGAGCATGCCCGGTTTCACCATG
TCAAATTAACCGGAGTGTTC

Downstream 100 bases:

>100_bases
AAAATGCTTATATCTGCGATGCCGTGCGTACCCCCTTTGGTCGTTACGGCGGTTCTCTGTCTTCCATTCGCGGCGACGAG
CTGGCGGCGCTGCCCATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MRSRTLFLFAGICAFSVANIYYNQPLLVLFAQTFGADVGQASSIAMTVQLAYAVGLVLFVPLGDWVSRRKLMISLLCVNA
AGSIWAASSSSLPMLIAAHVVIGMTSVGAQIIIPAVSLMMSPEQRGRAVGTVMSGLLAGILLARTLSGLVGGYAGWRTMY
ALAAGIDIGLIAVVAATLPASGGLARSSYGQLLRSLGQLLATERELRLACLCGALMFGAFSALWGALAYLLSRPPYRFHS
DAVGLFGLVGIAGIFASPFIGRLADRLGARAVVLLGAIAAACAFALIGSSASLLPALLLGIVILDLGGRAGLVGNQLRAL
SLSDSARSRLNTVFMACYFLGGALGTRAGAALAGEYGWSGIAALGLAASTVVIVLNANAIVALRLIWRVS

Sequences:

>Translated_390_residues
MRSRTLFLFAGICAFSVANIYYNQPLLVLFAQTFGADVGQASSIAMTVQLAYAVGLVLFVPLGDWVSRRKLMISLLCVNA
AGSIWAASSSSLPMLIAAHVVIGMTSVGAQIIIPAVSLMMSPEQRGRAVGTVMSGLLAGILLARTLSGLVGGYAGWRTMY
ALAAGIDIGLIAVVAATLPASGGLARSSYGQLLRSLGQLLATERELRLACLCGALMFGAFSALWGALAYLLSRPPYRFHS
DAVGLFGLVGIAGIFASPFIGRLADRLGARAVVLLGAIAAACAFALIGSSASLLPALLLGIVILDLGGRAGLVGNQLRAL
SLSDSARSRLNTVFMACYFLGGALGTRAGAALAGEYGWSGIAALGLAASTVVIVLNANAIVALRLIWRVS
>Mature_390_residues
MRSRTLFLFAGICAFSVANIYYNQPLLVLFAQTFGADVGQASSIAMTVQLAYAVGLVLFVPLGDWVSRRKLMISLLCVNA
AGSIWAASSSSLPMLIAAHVVIGMTSVGAQIIIPAVSLMMSPEQRGRAVGTVMSGLLAGILLARTLSGLVGGYAGWRTMY
ALAAGIDIGLIAVVAATLPASGGLARSSYGQLLRSLGQLLATERELRLACLCGALMFGAFSALWGALAYLLSRPPYRFHS
DAVGLFGLVGIAGIFASPFIGRLADRLGARAVVLLGAIAAACAFALIGSSASLLPALLLGIVILDLGGRAGLVGNQLRAL
SLSDSARSRLNTVFMACYFLGGALGTRAGAALAGEYGWSGIAALGLAASTVVIVLNANAIVALRLIWRVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=369, Percent_Identity=26.2872628726287, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40081; Mature: 40081

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRTLFLFAGICAFSVANIYYNQPLLVLFAQTFGADVGQASSIAMTVQLAYAVGLVLFV
CCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
PLGDWVSRRKLMISLLCVNAAGSIWAASSSSLPMLIAAHVVIGMTSVGAQIIIPAVSLMM
CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
SPEQRGRAVGTVMSGLLAGILLARTLSGLVGGYAGWRTMYALAAGIDIGLIAVVAATLPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
SGGLARSSYGQLLRSLGQLLATERELRLACLCGALMFGAFSALWGALAYLLSRPPYRFHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DAVGLFGLVGIAGIFASPFIGRLADRLGARAVVLLGAIAAACAFALIGSSASLLPALLLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVILDLGGRAGLVGNQLRALSLSDSARSRLNTVFMACYFLGGALGTRAGAALAGEYGWSG
HHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHH
IAALGLAASTVVIVLNANAIVALRLIWRVS
HHHHHHHHCEEEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MRSRTLFLFAGICAFSVANIYYNQPLLVLFAQTFGADVGQASSIAMTVQLAYAVGLVLFV
CCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
PLGDWVSRRKLMISLLCVNAAGSIWAASSSSLPMLIAAHVVIGMTSVGAQIIIPAVSLMM
CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
SPEQRGRAVGTVMSGLLAGILLARTLSGLVGGYAGWRTMYALAAGIDIGLIAVVAATLPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
SGGLARSSYGQLLRSLGQLLATERELRLACLCGALMFGAFSALWGALAYLLSRPPYRFHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DAVGLFGLVGIAGIFASPFIGRLADRLGARAVVLLGAIAAACAFALIGSSASLLPALLLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVILDLGGRAGLVGNQLRALSLSDSARSRLNTVFMACYFLGGALGTRAGAALAGEYGWSG
HHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHH
IAALGLAASTVVIVLNANAIVALRLIWRVS
HHHHHHHHCEEEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]