| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499742
Identifier: 34499742
GI number: 34499742
Start: 4626235
End: 4626645
Strand: Direct
Name: 34499742
Synonym: CV_4287
Alternate gene names: NA
Gene position: 4626235-4626645 (Clockwise)
Preceding gene: 34499741
Following gene: 34499743
Centisome position: 97.37
GC content: 68.86
Gene sequence:
>411_bases ATGATCCGATCCGCCCTGCGCCTGTCCGCCCTGCTTCTGCTCGGCCTCCTGTCCTTCCGCGCCTTCGCCTGCGCCGAAGA GGCGATGTACAGCCACCATTACGACCAGTGCATGGATCAGGCCGGCGGTGTCACCGCCGGCATGCTCGATTGCCTCTCGG CAGAACACGCGCGCCAGGACAAGCAGCTGAACGACACATACCGCAAGCTGATGGCCGCGCTGCCCGCCAAACGCCAGCAA AGGCTGCAAGTCGCCCAGCGGCTGTGGCTGAAATACCGCGCCGCCAACTGCAGCGCCTACGTCGACCCCGACGGCGGCAG CGCCGAATCGCTGGTGGCCGCCGACTGCGAGCTGGCGTCCACCGCCGCCCGCGCCGCCGAGCTGAGCAGGCTGCAGCCAA GCCCGCGCTGA
Upstream 100 bases:
>100_bases GGCGCGCTGCAGTTCTAGGGCGGAACCGGCCCGCCTCCGCGGGCCGGGCGCTTTTTCCGCTATCATGCCGCCTACCGCCC CTCAACAAGACAGTGGAACC
Downstream 100 bases:
>100_bases CGCCCGGACAAGCGGACTGATGCCGCGCGGCTCGGGCTGTGCGATGATGCCGACATCATCGCCGCCATCCGGAGCCGCCA TGTCCCTGATCCGCCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MIRSALRLSALLLLGLLSFRAFACAEEAMYSHHYDQCMDQAGGVTAGMLDCLSAEHARQDKQLNDTYRKLMAALPAKRQQ RLQVAQRLWLKYRAANCSAYVDPDGGSAESLVAADCELASTAARAAELSRLQPSPR
Sequences:
>Translated_136_residues MIRSALRLSALLLLGLLSFRAFACAEEAMYSHHYDQCMDQAGGVTAGMLDCLSAEHARQDKQLNDTYRKLMAALPAKRQQ RLQVAQRLWLKYRAANCSAYVDPDGGSAESLVAADCELASTAARAAELSRLQPSPR >Mature_136_residues MIRSALRLSALLLLGLLSFRAFACAEEAMYSHHYDQCMDQAGGVTAGMLDCLSAEHARQDKQLNDTYRKLMAALPAKRQQ RLQVAQRLWLKYRAANCSAYVDPDGGSAESLVAADCELASTAARAAELSRLQPSPR
Specific function: Unknown
COG id: COG3755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14903; Mature: 14903
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSALRLSALLLLGLLSFRAFACAEEAMYSHHYDQCMDQAGGVTAGMLDCLSAEHARQD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KQLNDTYRKLMAALPAKRQQRLQVAQRLWLKYRAANCSAYVDPDGGSAESLVAADCELAS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHH TAARAAELSRLQPSPR HHHHHHHHHHCCCCCC >Mature Secondary Structure MIRSALRLSALLLLGLLSFRAFACAEEAMYSHHYDQCMDQAGGVTAGMLDCLSAEHARQD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KQLNDTYRKLMAALPAKRQQRLQVAQRLWLKYRAANCSAYVDPDGGSAESLVAADCELAS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHH TAARAAELSRLQPSPR HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA