| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499741
Identifier: 34499741
GI number: 34499741
Start: 4624500
End: 4626152
Strand: Direct
Name: 34499741
Synonym: CV_4286
Alternate gene names: NA
Gene position: 4624500-4626152 (Clockwise)
Preceding gene: 34499740
Following gene: 34499742
Centisome position: 97.34
GC content: 67.15
Gene sequence:
>1653_bases ATGTCCGAACACGATACGCCCGAAACCGTTCCCGAAACCGCGCCGCAGGACCCGTCGCGCCGCCGCCTGTTCGAAGGCCT GGCCGCCATCGGCGCCGCCACCGTGCTGCCCGCCGTCGCCAGCGAAGCCGCCGACGCCGCGCCGGCCGCCCGCGGCTCGC TGGACGACAAGCTGCGCCATCATGTGAAGAACGTGGTCGTCATCTACCTGGAAAACCGCAGCTTCAACAATCTGTACGGC AACTTCCCCGGCGTGCGCTACCCGCTGTCCAAGGCCCCGGCCGAAGCCTGTATCCAGCTGGACCGCGACGGCGCCAGGCT GAAGAGCCTGCCCAAGATCTGGGGCGGCATGGTGCAGCGCGGCCAGACCGTCGGCGGCAAGTACTACCTGATCGAGGAAG ACAAGATCCAGAACCTGCCCAACGGCCCGTTCCCGCTGAAGGACACCGACGGAGAGCCGCTGCCCGAGGGCGTGATCACC CGCGACCTGTGGCATTTGTTCTACCAGAACCAGATGCAGATCAACGGCGGCCGGAACGACCAGTTCGTCGCCTGGGCCGA TTCCGGCGCGCTGGTGATGGGCTATTACAACGAGACCGCGAAGAACCTCAACCAATGGAAGATCGCCCAGCAATACACGC TGTGCGACAACTTCTTCATGGCGGCCTTCGGCGGCTCCTACCTCAACCACCAGTTCCTGATTTCCGCCCGCACGCCGGAA TACTTCAACGCCAAGGACACCGCCGCGGCCAAGAAGATCGCGGTGCTGGAGGATGGCCCCAAGGGCTACCGGCTGAAGGT GAAGACGCCGACTTCGGCGATGGACGGCCCGCCGCAGTTCGTCAACAACGGCGCCATCACGCCGGACGGCTACGCGGTCA ACACCATGGCCCCGCCGTTCCAGCCCAGCTACGTCAAGCCGGCCGAAGGCGGCGACAAGCGCTACGCCGATCCCGCCGAC GCCAACACCCTGCCGCCGCAGACCTACGACACCATCGGCGACCTGCTGTCGCGCAAGGGCGTCAGCTGGGCGTGGTACGG CGGCAGCTGGCAGGCGGCGCTGGACGGCAAGGGCGGTCCGGACACGCCCAACTTCCAGTACCACCACCAGCCGTTCAACT ACTTCAAGAACTTCGCGCCCGGTACCCAGGCGCGCGCCGAGCACCTGCGCGACGGCGGCCTGGGCGACAGCCCGATCAGC AACCGCTTCATCGCCGACGCGGTCGCCGGCAAGCTGCCGGCGGTGTCGTTCTACAAGCCGCAGGGCAACCTGAACATGCA CGCCGGCTACTCCGACGTGGAGAGCGGCGACCGCCACGTCGCCAACGTGCTGCAGCACCTGATGAGCGGCCCGCAGTGGA AGAACATGGTGGTGGTCATCACCCACGACGAGAATGGCGGCTGGTGGGACCACGTGGCGCCGCCCAAGGGCGACCGCTGG GGTCCGGGCAGCCGCATCCCCGCCATCGTGGTGTCGCCGTTCGCCAAGAAGGGCCATGTCGACCACACCTTCTACGACAC CACCTCCATCATCCGCTTCATCAGCCGCCTGCACGGCCTGCCGGAGCTGGAGGGCGTCAAGGTTCGCAACAAGGCCTTCC GCGAACGCGGCGCCCAACCGCCGGGCGACCTGACCGGCGCGCTGCAGTTCTAG
Upstream 100 bases:
>100_bases GACGCCGGACATGCCGGATGCCTGAACGCCTTCAGATCGGCATCAAAGCGGAGTAAAGTGGCGGTTTCCCGTTGAATGCC CGTCCCACAGGATGACCGCC
Downstream 100 bases:
>100_bases GGCGGAACCGGCCCGCCTCCGCGGGCCGGGCGCTTTTTCCGCTATCATGCCGCCTACCGCCCCTCAACAAGACAGTGGAA CCATGATCCGATCCGCCCTG
Product: acid phosphatase
Products: alcohol; phosphate
Alternate protein names: Acid Phosphatase; Phospholipase C; Non-Hemolytic Phospholipase C; Phospholipase C Phosphocholine-Specific; Twin-Arginine Translocation Pathway Signal; Phosphoesterase Family Protein; Acid Phosphatase AcpA; Phospholipase C Protein; Acid Phosphatase Protein; Phospholipase; Phosphesterase; Phosphoesterase Familiy Protein; Membrane-Associated Phospholipase C 2 PlcB; Membrane Associated Phosphoesterase
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MSEHDTPETVPETAPQDPSRRRLFEGLAAIGAATVLPAVASEAADAAPAARGSLDDKLRHHVKNVVVIYLENRSFNNLYG NFPGVRYPLSKAPAEACIQLDRDGARLKSLPKIWGGMVQRGQTVGGKYYLIEEDKIQNLPNGPFPLKDTDGEPLPEGVIT RDLWHLFYQNQMQINGGRNDQFVAWADSGALVMGYYNETAKNLNQWKIAQQYTLCDNFFMAAFGGSYLNHQFLISARTPE YFNAKDTAAAKKIAVLEDGPKGYRLKVKTPTSAMDGPPQFVNNGAITPDGYAVNTMAPPFQPSYVKPAEGGDKRYADPAD ANTLPPQTYDTIGDLLSRKGVSWAWYGGSWQAALDGKGGPDTPNFQYHHQPFNYFKNFAPGTQARAEHLRDGGLGDSPIS NRFIADAVAGKLPAVSFYKPQGNLNMHAGYSDVESGDRHVANVLQHLMSGPQWKNMVVVITHDENGGWWDHVAPPKGDRW GPGSRIPAIVVSPFAKKGHVDHTFYDTTSIIRFISRLHGLPELEGVKVRNKAFRERGAQPPGDLTGALQF
Sequences:
>Translated_550_residues MSEHDTPETVPETAPQDPSRRRLFEGLAAIGAATVLPAVASEAADAAPAARGSLDDKLRHHVKNVVVIYLENRSFNNLYG NFPGVRYPLSKAPAEACIQLDRDGARLKSLPKIWGGMVQRGQTVGGKYYLIEEDKIQNLPNGPFPLKDTDGEPLPEGVIT RDLWHLFYQNQMQINGGRNDQFVAWADSGALVMGYYNETAKNLNQWKIAQQYTLCDNFFMAAFGGSYLNHQFLISARTPE YFNAKDTAAAKKIAVLEDGPKGYRLKVKTPTSAMDGPPQFVNNGAITPDGYAVNTMAPPFQPSYVKPAEGGDKRYADPAD ANTLPPQTYDTIGDLLSRKGVSWAWYGGSWQAALDGKGGPDTPNFQYHHQPFNYFKNFAPGTQARAEHLRDGGLGDSPIS NRFIADAVAGKLPAVSFYKPQGNLNMHAGYSDVESGDRHVANVLQHLMSGPQWKNMVVVITHDENGGWWDHVAPPKGDRW GPGSRIPAIVVSPFAKKGHVDHTFYDTTSIIRFISRLHGLPELEGVKVRNKAFRERGAQPPGDLTGALQF >Mature_549_residues SEHDTPETVPETAPQDPSRRRLFEGLAAIGAATVLPAVASEAADAAPAARGSLDDKLRHHVKNVVVIYLENRSFNNLYGN FPGVRYPLSKAPAEACIQLDRDGARLKSLPKIWGGMVQRGQTVGGKYYLIEEDKIQNLPNGPFPLKDTDGEPLPEGVITR DLWHLFYQNQMQINGGRNDQFVAWADSGALVMGYYNETAKNLNQWKIAQQYTLCDNFFMAAFGGSYLNHQFLISARTPEY FNAKDTAAAKKIAVLEDGPKGYRLKVKTPTSAMDGPPQFVNNGAITPDGYAVNTMAPPFQPSYVKPAEGGDKRYADPADA NTLPPQTYDTIGDLLSRKGVSWAWYGGSWQAALDGKGGPDTPNFQYHHQPFNYFKNFAPGTQARAEHLRDGGLGDSPISN RFIADAVAGKLPAVSFYKPQGNLNMHAGYSDVESGDRHVANVLQHLMSGPQWKNMVVVITHDENGGWWDHVAPPKGDRWG PGSRIPAIVVSPFAKKGHVDHTFYDTTSIIRFISRLHGLPELEGVKVRNKAFRERGAQPPGDLTGALQF
Specific function: Unknown
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.2
Molecular weight: Translated: 60416; Mature: 60285
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHDTPETVPETAPQDPSRRRLFEGLAAIGAATVLPAVASEAADAAPAARGSLDDKLRH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH HVKNVVVIYLENRSFNNLYGNFPGVRYPLSKAPAEACIQLDRDGARLKSLPKIWGGMVQR HHCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHEECCCCHHHHHHHHHHHHHHHC GQTVGGKYYLIEEDKIQNLPNGPFPLKDTDGEPLPEGVITRDLWHLFYQNQMQINGGRND CCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCC QFVAWADSGALVMGYYNETAKNLNQWKIAQQYTLCDNFFMAAFGGSYLNHQFLISARTPE CEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC YFNAKDTAAAKKIAVLEDGPKGYRLKVKTPTSAMDGPPQFVNNGAITPDGYAVNTMAPPF CCCCCHHHHHHEEEEEECCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCEEECCCCCCC QPSYVKPAEGGDKRYADPADANTLPPQTYDTIGDLLSRKGVSWAWYGGSWQAALDGKGGP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCC DTPNFQYHHQPFNYFKNFAPGTQARAEHLRDGGLGDSPISNRFIADAVAGKLPAVSFYKP CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECC QGNLNMHAGYSDVESGDRHVANVLQHLMSGPQWKNMVVVITHDENGGWWDHVAPPKGDRW CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC GPGSRIPAIVVSPFAKKGHVDHTFYDTTSIIRFISRLHGLPELEGVKVRNKAFRERGAQP CCCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCC PGDLTGALQF CCCCCCCCCC >Mature Secondary Structure SEHDTPETVPETAPQDPSRRRLFEGLAAIGAATVLPAVASEAADAAPAARGSLDDKLRH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH HVKNVVVIYLENRSFNNLYGNFPGVRYPLSKAPAEACIQLDRDGARLKSLPKIWGGMVQR HHCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHEECCCCHHHHHHHHHHHHHHHC GQTVGGKYYLIEEDKIQNLPNGPFPLKDTDGEPLPEGVITRDLWHLFYQNQMQINGGRND CCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCC QFVAWADSGALVMGYYNETAKNLNQWKIAQQYTLCDNFFMAAFGGSYLNHQFLISARTPE CEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC YFNAKDTAAAKKIAVLEDGPKGYRLKVKTPTSAMDGPPQFVNNGAITPDGYAVNTMAPPF CCCCCHHHHHHEEEEEECCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCEEECCCCCCC QPSYVKPAEGGDKRYADPADANTLPPQTYDTIGDLLSRKGVSWAWYGGSWQAALDGKGGP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCC DTPNFQYHHQPFNYFKNFAPGTQARAEHLRDGGLGDSPISNRFIADAVAGKLPAVSFYKP CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECC QGNLNMHAGYSDVESGDRHVANVLQHLMSGPQWKNMVVVITHDENGGWWDHVAPPKGDRW CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC GPGSRIPAIVVSPFAKKGHVDHTFYDTTSIIRFISRLHGLPELEGVKVRNKAFRERGAQP CCCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCC PGDLTGALQF CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphate monoester; H2O
Specific reaction: A phosphate monoester + H2O = an alcohol + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA