| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499725
Identifier: 34499725
GI number: 34499725
Start: 4605219
End: 4606496
Strand: Reverse
Name: 34499725
Synonym: CV_4270
Alternate gene names: NA
Gene position: 4606496-4605219 (Counterclockwise)
Preceding gene: 34499728
Following gene: 34499720
Centisome position: 96.96
GC content: 51.88
Gene sequence:
>1278_bases ATGAACGATATCGTTAAAGAAGCGGTGAGTGCGCCTGGAATGCTTGATTCCGAGTCGGAGCTTTGGGGTAGCGTCATTCT AAGGCAGATGAAGGGAGATAGTGATGTTCAGGCAATGATTACGGTCCGTAAAAAAATGCCTGCAAGGACATCCAATCAAC TTTTTTCAGATGTGTTCGCAGCAGTGTACATCGACACATATTGGACGAGTCAAGGTGCGAGCGCTGATATCTTGGCTACG AGTTTAGCTGCGGCGATGGGGATTAGTCAGGTGGATGCGCTGCAGTACGCCAGGGTATCGTTCAGGCAATGGCGCGGCAT ATTGTGCCGAAAATATCCAGGCGATGGGGGAGCCATTCCGTCTCCTAATTATTTTAATGCCTTGGATATTGTCACTTCTC AAGTATTGGTCTTAACACCGAGAGAGCTGATTGATCATTGGGACTCGACAGTTAATCCGCCCAAAGCAGGTGTCAATTAT GCTTATGCCCGCTGTCAAAACCTAGGATTTGAAGGAGAGATTTCTGGTATCAAGGTGCGGATGTTCGCTGTGCCGGCTGG TTTTACTCAAACGGCTAGCTCCTGGGTTCAATGCCGTACGCGCGATGGCGATCAGGAAGAAGGAAACATTCTTGATAGAA ATGGTCACCCAGCCAAGTTGACGACTGGTGAACGAGGAGCGTCGGAAGCTTTCGTTGCCGATCTGCCTCTAGGGCATGTC TGCCTGGTCGCCACGATAACCGATGCTGATTTCTTTACAAAAAATAATCCGCTGACAATTGAGCAGGGGAACTGGAACTT CGTGACTTGGCTTATCAATAACGGTGCTGCGGCTTGGCGCAATGTGAATACGGTGCCGAAACTCGGAGAAACATCGCTGG TTTTCCACAATCAGGACGGTACGCCGGAGCAGTTCAGTTTTGTTATGAGGTGCCGTCGCGTGCCGGAGGGCTCCAAGCTG CGGATGTATTCGGACGATCCTGATGCGGCATTTGACAGCGGCATGGTAACGGTTGTCAAAGACAGCCAGGAATTGCGGGT CTCCGTCATTGCGCCGCCACTCTACGCTGGCCAGCTGAAGCTGCATCTGGAAGGGCCGAACGGCAGAGGATTGCCGAGCA GCGCTTCGGTGGAGATTGGAATGCTCTGGTGCGTGCCGCATTCGAACAGCCATTATCTGCAGGCCGTCGATTTACTTGGG GAAGTCGGAGCGGTGCCAACCTTGCGCAGCGTGCATGTGCCTATGGGCTATTTCACCTTCTTGGGGGAAAACGAATAG
Upstream 100 bases:
>100_bases CCCAAATGGCGGCCTGACTGTGTGCATTACGCACGGAAATTAGATCATCTCGTTGCGGGGGCTGTTTCAGCTTTAGTCAC TTTGGCGTGGAGTTTATGTC
Downstream 100 bases:
>100_bases GCGGGATATCTCTGCCTAGGCTTTGAATATGGCGAAAAAACAGCCCTGTCGGCAACGCCGGCAGGGCTGTTTGTTGATCG GTTCGGGAGCCCCGGGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MNDIVKEAVSAPGMLDSESELWGSVILRQMKGDSDVQAMITVRKKMPARTSNQLFSDVFAAVYIDTYWTSQGASADILAT SLAAAMGISQVDALQYARVSFRQWRGILCRKYPGDGGAIPSPNYFNALDIVTSQVLVLTPRELIDHWDSTVNPPKAGVNY AYARCQNLGFEGEISGIKVRMFAVPAGFTQTASSWVQCRTRDGDQEEGNILDRNGHPAKLTTGERGASEAFVADLPLGHV CLVATITDADFFTKNNPLTIEQGNWNFVTWLINNGAAAWRNVNTVPKLGETSLVFHNQDGTPEQFSFVMRCRRVPEGSKL RMYSDDPDAAFDSGMVTVVKDSQELRVSVIAPPLYAGQLKLHLEGPNGRGLPSSASVEIGMLWCVPHSNSHYLQAVDLLG EVGAVPTLRSVHVPMGYFTFLGENE
Sequences:
>Translated_425_residues MNDIVKEAVSAPGMLDSESELWGSVILRQMKGDSDVQAMITVRKKMPARTSNQLFSDVFAAVYIDTYWTSQGASADILAT SLAAAMGISQVDALQYARVSFRQWRGILCRKYPGDGGAIPSPNYFNALDIVTSQVLVLTPRELIDHWDSTVNPPKAGVNY AYARCQNLGFEGEISGIKVRMFAVPAGFTQTASSWVQCRTRDGDQEEGNILDRNGHPAKLTTGERGASEAFVADLPLGHV CLVATITDADFFTKNNPLTIEQGNWNFVTWLINNGAAAWRNVNTVPKLGETSLVFHNQDGTPEQFSFVMRCRRVPEGSKL RMYSDDPDAAFDSGMVTVVKDSQELRVSVIAPPLYAGQLKLHLEGPNGRGLPSSASVEIGMLWCVPHSNSHYLQAVDLLG EVGAVPTLRSVHVPMGYFTFLGENE >Mature_425_residues MNDIVKEAVSAPGMLDSESELWGSVILRQMKGDSDVQAMITVRKKMPARTSNQLFSDVFAAVYIDTYWTSQGASADILAT SLAAAMGISQVDALQYARVSFRQWRGILCRKYPGDGGAIPSPNYFNALDIVTSQVLVLTPRELIDHWDSTVNPPKAGVNY AYARCQNLGFEGEISGIKVRMFAVPAGFTQTASSWVQCRTRDGDQEEGNILDRNGHPAKLTTGERGASEAFVADLPLGHV CLVATITDADFFTKNNPLTIEQGNWNFVTWLINNGAAAWRNVNTVPKLGETSLVFHNQDGTPEQFSFVMRCRRVPEGSKL RMYSDDPDAAFDSGMVTVVKDSQELRVSVIAPPLYAGQLKLHLEGPNGRGLPSSASVEIGMLWCVPHSNSHYLQAVDLLG EVGAVPTLRSVHVPMGYFTFLGENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46455; Mature: 46455
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIVKEAVSAPGMLDSESELWGSVILRQMKGDSDVQAMITVRKKMPARTSNQLFSDVFA CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH AVYIDTYWTSQGASADILATSLAAAMGISQVDALQYARVSFRQWRGILCRKYPGDGGAIP HHHEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC SPNYFNALDIVTSQVLVLTPRELIDHWDSTVNPPKAGVNYAYARCQNLGFEGEISGIKVR CCCCCHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEE MFAVPAGFTQTASSWVQCRTRDGDQEEGNILDRNGHPAKLTTGERGASEAFVADLPLGHV EEEECCCCHHHHHHHHEEECCCCCCCCCCEECCCCCCCEEECCCCCCCCCEEECCCCCCE CLVATITDADFFTKNNPLTIEQGNWNFVTWLINNGAAAWRNVNTVPKLGETSLVFHNQDG EEEEEEECCHHEECCCCEEEECCCCEEEEEEEECCCHHHCCCCCCCCCCCEEEEEECCCC TPEQFSFVMRCRRVPEGSKLRMYSDDPDAAFDSGMVTVVKDSQELRVSVIAPPLYAGQLK CHHHHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCEEEEECCCEEEEEEECCCEEECEEE LHLEGPNGRGLPSSASVEIGMLWCVPHSNSHYLQAVDLLGEVGAVPTLRSVHVPMGYFTF EEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEE LGENE ECCCC >Mature Secondary Structure MNDIVKEAVSAPGMLDSESELWGSVILRQMKGDSDVQAMITVRKKMPARTSNQLFSDVFA CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH AVYIDTYWTSQGASADILATSLAAAMGISQVDALQYARVSFRQWRGILCRKYPGDGGAIP HHHEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC SPNYFNALDIVTSQVLVLTPRELIDHWDSTVNPPKAGVNYAYARCQNLGFEGEISGIKVR CCCCCHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEE MFAVPAGFTQTASSWVQCRTRDGDQEEGNILDRNGHPAKLTTGERGASEAFVADLPLGHV EEEECCCCHHHHHHHHEEECCCCCCCCCCEECCCCCCCEEECCCCCCCCCEEECCCCCCE CLVATITDADFFTKNNPLTIEQGNWNFVTWLINNGAAAWRNVNTVPKLGETSLVFHNQDG EEEEEEECCHHEECCCCEEEECCCCEEEEEEEECCCHHHCCCCCCCCCCCEEEEEECCCC TPEQFSFVMRCRRVPEGSKLRMYSDDPDAAFDSGMVTVVKDSQELRVSVIAPPLYAGQLK CHHHHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCEEEEECCCEEEEEEECCCEEECEEE LHLEGPNGRGLPSSASVEIGMLWCVPHSNSHYLQAVDLLGEVGAVPTLRSVHVPMGYFTF EEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEE LGENE ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA