| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499698
Identifier: 34499698
GI number: 34499698
Start: 4580320
End: 4580721
Strand: Direct
Name: 34499698
Synonym: CV_4243
Alternate gene names: NA
Gene position: 4580320-4580721 (Clockwise)
Preceding gene: 34499694
Following gene: 34499700
Centisome position: 96.41
GC content: 71.14
Gene sequence:
>402_bases ATGAGCTGCGAACTGTGCCGGCAACCCGCCGGCGACCTGCTGTACCAGAACGACAAGCTGTGGCTGGTGCTGGTGGACGA GCCCGGCTACCCGGGCTTCTGCCGCGTGGTCTGGAAGGCCCACGTCAAGGAGATGACCGATCTCTCCGCAGACGAGCGCC AGCACCTGATGGACTGGGTGTGGCGCGCCGAGGCGGCCGTCCGCCAAGTCATGCAGCCGGCCAAGGTCAACCTGGCCAGC CTGGGCAATGTGGTGCCCCACCTGCACTGGCACGTGATTCCCCGCTTCGAGGACGACGCCCACTTCCCCAGCCCGATCTG GGCCGCGCCGCGCCGCGAAGCGCCGGCGCGCGCCTGGCCGGGCCTGGCCGACCGGCTGCGCCAGGCGCTGCTGGCCGGCT GA
Upstream 100 bases:
>100_bases AACGCATGGATTTGATGTCCAGTATAACAGAGCCGTTTTCGCCCACCGCCCCGCCGCCGCCGGCCGCGCGTACAATCGGG CCATTTCATCGGAGGAACGT
Downstream 100 bases:
>100_bases CCGCCGCCTCAGGCGGTGCGAAAGCGGCTGATCGCCTCGTCCAGGCTGTGCGCCAGGCCAGACAGCTGGCTGGCCATCGC CGACGACGACTCCACCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: HIT Family Hydrolase; Histidine Triad Family Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad-Like; Hit Family Protein; HIT Domain-Containing Protein; HIT Family Protein; HIT Domain-Containing
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSCELCRQPAGDLLYQNDKLWLVLVDEPGYPGFCRVVWKAHVKEMTDLSADERQHLMDWVWRAEAAVRQVMQPAKVNLAS LGNVVPHLHWHVIPRFEDDAHFPSPIWAAPRREAPARAWPGLADRLRQALLAG
Sequences:
>Translated_133_residues MSCELCRQPAGDLLYQNDKLWLVLVDEPGYPGFCRVVWKAHVKEMTDLSADERQHLMDWVWRAEAAVRQVMQPAKVNLAS LGNVVPHLHWHVIPRFEDDAHFPSPIWAAPRREAPARAWPGLADRLRQALLAG >Mature_132_residues SCELCRQPAGDLLYQNDKLWLVLVDEPGYPGFCRVVWKAHVKEMTDLSADERQHLMDWVWRAEAAVRQVMQPAKVNLASL GNVVPHLHWHVIPRFEDDAHFPSPIWAAPRREAPARAWPGLADRLRQALLAG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15210; Mature: 15078
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCELCRQPAGDLLYQNDKLWLVLVDEPGYPGFCRVVWKAHVKEMTDLSADERQHLMDWV CCCHHHCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH WRAEAAVRQVMQPAKVNLASLGNVVPHLHWHVIPRFEDDAHFPSPIWAAPRREAPARAWP HHHHHHHHHHHCCHHCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC GLADRLRQALLAG CHHHHHHHHHHCC >Mature Secondary Structure SCELCRQPAGDLLYQNDKLWLVLVDEPGYPGFCRVVWKAHVKEMTDLSADERQHLMDWV CCHHHCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH WRAEAAVRQVMQPAKVNLASLGNVVPHLHWHVIPRFEDDAHFPSPIWAAPRREAPARAWP HHHHHHHHHHHCCHHCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC GLADRLRQALLAG CHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA