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The map label for this gene is yecD [C]

Identifier: 34499694

GI number: 34499694

Start: 4575986

End: 4576510

Strand: Direct

Name: yecD [C]

Synonym: CV_4239

Alternate gene names: 34499694

Gene position: 4575986-4576510 (Clockwise)

Preceding gene: 34499693

Following gene: 34499698

Centisome position: 96.31

GC content: 67.43

Gene sequence:

>525_bases
ATGTCCGATACCGCCCTGCTGATCATCGACGTCCAGGTCGGCGTCGTCGAGGGGGAGCCGCGCGCCGCCCGCCTCGACTC
GGTGCTCGACAGCCTCAACCTCGCCATCCTCAAGGCCCGCCAGCGCGGCATGCCGGTGATTTTCGTCCAGCATGAGGAAG
ACGATCTGCCGCGCGGCTCCGACGCCTGGCAACTGCATCCCAAGCTCGCGCGGCAGGACGGCGACCCCATCATCTACAAG
CGCTACGGCGACAGCTTCTGCGAAACCGATCTGGCGCAGCTGCTGTCGGCGCGCGGCGCGAGCAAGCTGTGGGTAGGCGG
CGCCGCCACCGATTTCTGCGTCGACAGCACCTTGCGCAACGCGGTGTCCCGCGGCTATCAGGTCACCGCCATCGCCGACG
GCCATACCACGCTCAGCGCCTTCGCCTTGAGCGGCGAGCAGGTGATCGACCATTTCAACGCCATCTGGCAAGCCTCCAGC
GCCACGCCTCAGCCGTTGCGAGTGCTGCCGGCGGCGGAACTGTAA

Upstream 100 bases:

>100_bases
TTCGAAGGCGACGCGTCGCATGCGCTAACCCGGAAGCCTTGATCTGAAGCCCCATGCCGCAGGCGCCGCCTGCCGGCAGC
ACCCATCCAGGAGAAAAGCC

Downstream 100 bases:

>100_bases
ATCCGTTCCAGCCATGAAAAACGGCGGGGAATCCCCGCCGTTTTTCCGTCCTCGCACGCTTACTTCTTGGCCGCTTTGGC
TTTGGCCGCGGCAGCGGCTG

Product: amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSDTALLIIDVQVGVVEGEPRAARLDSVLDSLNLAILKARQRGMPVIFVQHEEDDLPRGSDAWQLHPKLARQDGDPIIYK
RYGDSFCETDLAQLLSARGASKLWVGGAATDFCVDSTLRNAVSRGYQVTAIADGHTTLSAFALSGEQVIDHFNAIWQASS
ATPQPLRVLPAAEL

Sequences:

>Translated_174_residues
MSDTALLIIDVQVGVVEGEPRAARLDSVLDSLNLAILKARQRGMPVIFVQHEEDDLPRGSDAWQLHPKLARQDGDPIIYK
RYGDSFCETDLAQLLSARGASKLWVGGAATDFCVDSTLRNAVSRGYQVTAIADGHTTLSAFALSGEQVIDHFNAIWQASS
ATPQPLRVLPAAEL
>Mature_173_residues
SDTALLIIDVQVGVVEGEPRAARLDSVLDSLNLAILKARQRGMPVIFVQHEEDDLPRGSDAWQLHPKLARQDGDPIIYKR
YGDSFCETDLAQLLSARGASKLWVGGAATDFCVDSTLRNAVSRGYQVTAIADGHTTLSAFALSGEQVIDHFNAIWQASSA
TPQPLRVLPAAEL

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 18840; Mature: 18709

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTALLIIDVQVGVVEGEPRAARLDSVLDSLNLAILKARQRGMPVIFVQHEEDDLPRGS
CCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
DAWQLHPKLARQDGDPIIYKRYGDSFCETDLAQLLSARGASKLWVGGAATDFCVDSTLRN
CCEEECHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
AVSRGYQVTAIADGHTTLSAFALSGEQVIDHFNAIWQASSATPQPLRVLPAAEL
HHHCCEEEEEEECCCCEEEHEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
SDTALLIIDVQVGVVEGEPRAARLDSVLDSLNLAILKARQRGMPVIFVQHEEDDLPRGS
CCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
DAWQLHPKLARQDGDPIIYKRYGDSFCETDLAQLLSARGASKLWVGGAATDFCVDSTLRN
CCEEECHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
AVSRGYQVTAIADGHTTLSAFALSGEQVIDHFNAIWQASSATPQPLRVLPAAEL
HHHCCEEEEEEECCCCEEEHEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA