| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499682
Identifier: 34499682
GI number: 34499682
Start: 4560677
End: 4561333
Strand: Reverse
Name: 34499682
Synonym: CV_4227
Alternate gene names: NA
Gene position: 4561333-4560677 (Counterclockwise)
Preceding gene: 34499683
Following gene: 34499681
Centisome position: 96.01
GC content: 69.41
Gene sequence:
>657_bases ATGCGCTGGCAGATCCTTTGCCTGTTGCTGCTGCCGCTGGCGGCCGGCGCCGCCGATCTCAGGCAGCGGCAGTGTTTCCC GTCGCAGGCCTTGCGCGTGTGCCTGTGGCAGGATGCCAGGCTCGCCGCGCTGCAGGACGGCGGTTTCGGCGGAAGCGAGG GCGACGAGTGGAAGCCGGCCTTGGCGCCGGCCGAGTTGCGCATCTACGACAGTCAGGGCGGCCAGTTGTCGCGCCTGCGG GTGGGACGGCTGTCCATGATTGAGCGAACCCGGCTCAGCGACGGAGGCAAGCCAGTGTTTCTGCTCAAGGAAGACCATGC CGCGGGTTTCGGCTCTTACTCCGGCGTCGAGGCGCGGCCGTTCACCGTCGGCGCGCGCGGCATCCGCTTCGCCCAGCCGC AGGGCGGCGATCCGGCCCAGCCGTTCGCGATGGCGAGCGCGCTGAAGAGCGGCTGGAAAGAGGCGCGGGATGGCTTCCTG CTGGTGTCCTGCGCGCCGGACTTCCCGGCCAAGGGCGAGTGGGACGGCGAAACCTTCCGCGTCAGCTATCGCCGTCTGAA GCTGCAGGATGGCCAATGGCGGCTGACCGAGCGCAGCGCGCGCGGCTTCTGGGAGAACGAAGGCGACTTCCCGGCCGAGC GGCTGTTCCCGAAATGA
Upstream 100 bases:
>100_bases TGGCGCCGTTCTACCAACTGCTGGTCGACCTGGTGGGCCGCGACGCCACCGACGAGGAATTGCAGTCCAGCTACCCGGTG CTGGGCGTGAAAGGCCATTG
Downstream 100 bases:
>100_bases ACGAGAAGAACATGAAGGCAATGATATTGGCGGCCGGCCGCGGCGAGCGGATGCGGCCGCTGACCGACCATACGCCCAAG CCGCTGCTGATGGCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRWQILCLLLLPLAAGAADLRQRQCFPSQALRVCLWQDARLAALQDGGFGGSEGDEWKPALAPAELRIYDSQGGQLSRLR VGRLSMIERTRLSDGGKPVFLLKEDHAAGFGSYSGVEARPFTVGARGIRFAQPQGGDPAQPFAMASALKSGWKEARDGFL LVSCAPDFPAKGEWDGETFRVSYRRLKLQDGQWRLTERSARGFWENEGDFPAERLFPK
Sequences:
>Translated_218_residues MRWQILCLLLLPLAAGAADLRQRQCFPSQALRVCLWQDARLAALQDGGFGGSEGDEWKPALAPAELRIYDSQGGQLSRLR VGRLSMIERTRLSDGGKPVFLLKEDHAAGFGSYSGVEARPFTVGARGIRFAQPQGGDPAQPFAMASALKSGWKEARDGFL LVSCAPDFPAKGEWDGETFRVSYRRLKLQDGQWRLTERSARGFWENEGDFPAERLFPK >Mature_218_residues MRWQILCLLLLPLAAGAADLRQRQCFPSQALRVCLWQDARLAALQDGGFGGSEGDEWKPALAPAELRIYDSQGGQLSRLR VGRLSMIERTRLSDGGKPVFLLKEDHAAGFGSYSGVEARPFTVGARGIRFAQPQGGDPAQPFAMASALKSGWKEARDGFL LVSCAPDFPAKGEWDGETFRVSYRRLKLQDGQWRLTERSARGFWENEGDFPAERLFPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24175; Mature: 24175
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWQILCLLLLPLAAGAADLRQRQCFPSQALRVCLWQDARLAALQDGGFGGSEGDEWKPA CCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC LAPAELRIYDSQGGQLSRLRVGRLSMIERTRLSDGGKPVFLLKEDHAAGFGSYSGVEARP CCCEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC FTVGARGIRFAQPQGGDPAQPFAMASALKSGWKEARDGFLLVSCAPDFPAKGEWDGETFR EEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEE VSYRRLKLQDGQWRLTERSARGFWENEGDFPAERLFPK EEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure MRWQILCLLLLPLAAGAADLRQRQCFPSQALRVCLWQDARLAALQDGGFGGSEGDEWKPA CCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC LAPAELRIYDSQGGQLSRLRVGRLSMIERTRLSDGGKPVFLLKEDHAAGFGSYSGVEARP CCCEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC FTVGARGIRFAQPQGGDPAQPFAMASALKSGWKEARDGFLLVSCAPDFPAKGEWDGETFR EEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEE VSYRRLKLQDGQWRLTERSARGFWENEGDFPAERLFPK EEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA