| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499599
Identifier: 34499599
GI number: 34499599
Start: 4484562
End: 4485794
Strand: Direct
Name: 34499599
Synonym: CV_4144
Alternate gene names: NA
Gene position: 4484562-4485794 (Clockwise)
Preceding gene: 34499593
Following gene: 34499600
Centisome position: 94.39
GC content: 64.4
Gene sequence:
>1233_bases ATGGAATCCGATACCATGACTCAATCCGATTATGCCGCCACCGACGGCGCCTCCCTGATCTGGCCCGAAATCAACAGCCA CTTCCTGTCGCTGCGCGGCATACCGGAACACCTGCAAGCGGATACGCCCATCCGGGCGACATATCGCCGCCTGCTGGTCG GTTTCGACGCCATCACCTCCTGCGAACTGAAAGACCTGTACAAATTCACGCTCTGCCTGCAGCAACTGGCACCGGAGGAG GCCGACTGCCCCGAGCTGCGCCTGCTGGTGGCCGCCTTCCGCGCCTGGGTCAGCTTCGACTATCCCCGAGCGCGCCTGCT GTTCCGCCAGCATCTGGACATCTACCCCAGCGACATCGTGGCGCTGTTCTTCACCCACATGTTCGACTTCTGCACCGGCC ACACGCCGGAACTGATGCCGGACCTGGAACGCTGCGACCGCCATATCGGCGAAGATCACCCCCTTTACTCCTATTACCTA TCGATCAAGGCCTTCGTCACCGTCGAAGCCGGCCACCCGGCCCAGGCGCTGAAACTGGGCCTGGAGTCGTTGCGCCATCG CGCCGACAACATCTACGGCATCCACGCGGTCGCGCATGCGCTGCACGAGCAGGAATGCTGGAAGGAGCTGTGCCTCTTCC TCGAGCAATGCAAGGCGCAGTGGATAGACAATGCCGGCATGCGCATGCATGTCTACTGGCACCTGGCGATCGGTTACGAG AAAAGCCAGCAGACCGAGCAGTCGGTGCGAACCTTCCACGACATGTACGCGCTGAAGGACAGCCGCTTCGCCAAGCAGGA TCTGGACGCGGTCGCCTTCCTGTGGCGCTACCGCCTCAACCATCCCGGCGACAACCGTTTCGACGACGTCTGGCAGCAAC TGGCCTTCCTGTGGAGCGGCAGCATAGGCGCCTCGATGTCCCATTTCCACCGCCTGCACGCCGCGCTGGCCTTCGCCGCC AGCGGCCAGCCGGTGCTGATCGAAAAGCTGATCGCGGAAAGCGACGGCTTCGGCCTGGACCCGCAAACGCATCAGACCGG CGTCACCGTGCTGAAAGGCATCCATCACTTCGCCGAAGGCCGCTACGCGGACAGCCTCGGCGCCCTGCAGGCGGCGCAGC CTCACTGGAGCGTGCTGGGCGGCAGCCGGGCGCAGCGCGAGCTGCTGCCGCTGACCCTGCAGGCCTGCGAGCGGCGGCTG GCCAAGCATGAGGCAGTCCATGCAGCGGCCTGA
Upstream 100 bases:
>100_bases GCGTCATCGCCTCGCCCCATCATGAGCAATCGCTCATTTTACCATGACTCGCATTTGGCATAAGAATATGCCCACTTAAA CTAACCTTGTTCAGCCCGCC
Downstream 100 bases:
>100_bases ACGCGACGCCTCTCCCCGGCTGTATTTGCAACTGGTGCTGGTTGCAGTGATCTGGGGCGGCACCTTCATCGCCGGACGCC TGCTGGCCGGCGGGCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MESDTMTQSDYAATDGASLIWPEINSHFLSLRGIPEHLQADTPIRATYRRLLVGFDAITSCELKDLYKFTLCLQQLAPEE ADCPELRLLVAAFRAWVSFDYPRARLLFRQHLDIYPSDIVALFFTHMFDFCTGHTPELMPDLERCDRHIGEDHPLYSYYL SIKAFVTVEAGHPAQALKLGLESLRHRADNIYGIHAVAHALHEQECWKELCLFLEQCKAQWIDNAGMRMHVYWHLAIGYE KSQQTEQSVRTFHDMYALKDSRFAKQDLDAVAFLWRYRLNHPGDNRFDDVWQQLAFLWSGSIGASMSHFHRLHAALAFAA SGQPVLIEKLIAESDGFGLDPQTHQTGVTVLKGIHHFAEGRYADSLGALQAAQPHWSVLGGSRAQRELLPLTLQACERRL AKHEAVHAAA
Sequences:
>Translated_410_residues MESDTMTQSDYAATDGASLIWPEINSHFLSLRGIPEHLQADTPIRATYRRLLVGFDAITSCELKDLYKFTLCLQQLAPEE ADCPELRLLVAAFRAWVSFDYPRARLLFRQHLDIYPSDIVALFFTHMFDFCTGHTPELMPDLERCDRHIGEDHPLYSYYL SIKAFVTVEAGHPAQALKLGLESLRHRADNIYGIHAVAHALHEQECWKELCLFLEQCKAQWIDNAGMRMHVYWHLAIGYE KSQQTEQSVRTFHDMYALKDSRFAKQDLDAVAFLWRYRLNHPGDNRFDDVWQQLAFLWSGSIGASMSHFHRLHAALAFAA SGQPVLIEKLIAESDGFGLDPQTHQTGVTVLKGIHHFAEGRYADSLGALQAAQPHWSVLGGSRAQRELLPLTLQACERRL AKHEAVHAAA >Mature_410_residues MESDTMTQSDYAATDGASLIWPEINSHFLSLRGIPEHLQADTPIRATYRRLLVGFDAITSCELKDLYKFTLCLQQLAPEE ADCPELRLLVAAFRAWVSFDYPRARLLFRQHLDIYPSDIVALFFTHMFDFCTGHTPELMPDLERCDRHIGEDHPLYSYYL SIKAFVTVEAGHPAQALKLGLESLRHRADNIYGIHAVAHALHEQECWKELCLFLEQCKAQWIDNAGMRMHVYWHLAIGYE KSQQTEQSVRTFHDMYALKDSRFAKQDLDAVAFLWRYRLNHPGDNRFDDVWQQLAFLWSGSIGASMSHFHRLHAALAFAA SGQPVLIEKLIAESDGFGLDPQTHQTGVTVLKGIHHFAEGRYADSLGALQAAQPHWSVLGGSRAQRELLPLTLQACERRL AKHEAVHAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI116812608, Length=311, Percent_Identity=25.08038585209, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17537551, Length=371, Percent_Identity=25.0673854447439, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564653, Length=376, Percent_Identity=25.7978723404255, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46622; Mature: 46622
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESDTMTQSDYAATDGASLIWPEINSHFLSLRGIPEHLQADTPIRATYRRLLVGFDAITS CCCCCCCCCCCCCCCCCEEECCCCCCHHEEECCCHHHHCCCCCHHHHHHHHHHHHHHHCC CELKDLYKFTLCLQQLAPEEADCPELRLLVAAFRAWVSFDYPRARLLFRQHLDIYPSDIV CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH ALFFTHMFDFCTGHTPELMPDLERCDRHIGEDHPLYSYYLSIKAFVTVEAGHPAQALKLG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEECCCCHHHHHHH LESLRHRADNIYGIHAVAHALHEQECWKELCLFLEQCKAQWIDNAGMRMHVYWHLAIGYE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCC KSQQTEQSVRTFHDMYALKDSRFAKQDLDAVAFLWRYRLNHPGDNRFDDVWQQLAFLWSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC SIGASMSHFHRLHAALAFAASGQPVLIEKLIAESDGFGLDPQTHQTGVTVLKGIHHFAEG CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC RYADSLGALQAAQPHWSVLGGSRAQRELLPLTLQACERRLAKHEAVHAAA CHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MESDTMTQSDYAATDGASLIWPEINSHFLSLRGIPEHLQADTPIRATYRRLLVGFDAITS CCCCCCCCCCCCCCCCCEEECCCCCCHHEEECCCHHHHCCCCCHHHHHHHHHHHHHHHCC CELKDLYKFTLCLQQLAPEEADCPELRLLVAAFRAWVSFDYPRARLLFRQHLDIYPSDIV CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH ALFFTHMFDFCTGHTPELMPDLERCDRHIGEDHPLYSYYLSIKAFVTVEAGHPAQALKLG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEECCCCHHHHHHH LESLRHRADNIYGIHAVAHALHEQECWKELCLFLEQCKAQWIDNAGMRMHVYWHLAIGYE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCC KSQQTEQSVRTFHDMYALKDSRFAKQDLDAVAFLWRYRLNHPGDNRFDDVWQQLAFLWSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC SIGASMSHFHRLHAALAFAASGQPVLIEKLIAESDGFGLDPQTHQTGVTVLKGIHHFAEG CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC RYADSLGALQAAQPHWSVLGGSRAQRELLPLTLQACERRLAKHEAVHAAA CHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA