| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499593
Identifier: 34499593
GI number: 34499593
Start: 4479336
End: 4479785
Strand: Direct
Name: 34499593
Synonym: CV_4138
Alternate gene names: NA
Gene position: 4479336-4479785 (Clockwise)
Preceding gene: 34499592
Following gene: 34499599
Centisome position: 94.28
GC content: 59.78
Gene sequence:
>450_bases ATGTCCTTCTCCAGCGTTCCCTTTTTCATCACCTTCGCCGAGAACCCCGAGCTGGCCATCTGCGCCGAAGACTCCATCAA AGGCGCCAGGCTGGTGCTCAAGCCCTTCAAAAACAATCTGCTGGCCTTGTTCAATGTCGACTTCGTACAGGGTCTGTTCG GCCTGGCCACCAGCGGCAATCAACTAGTCATCGGCGCGGAGAACATCACGCTGGGCGCCCCGCTTGCTCTGCAATTGCTG CAGCCGGAGAGCAGCAAGCTGCAGCGCTGGGACATTTTTTCCGCTCCCGGCAATATCGTCAGCGCCGCCGATTCCTGCCT GGCCTTTGGCTACCGGCTGCGCACCGAGCCGCCCCTGCAACTGACCGAGCTCAATGCGCCTCCCTTCCCGCAATGGATTT TCCTGCCTTTTACCACCACCCAGCGCGGAATTCTGGAGTCGGCGGTTTAA
Upstream 100 bases:
>100_bases CGCCCAGAAAGCCGAACTGGTAGCCGAAACGGTCTAAGCCTGCGCGTTCCGGCGGAAGAAATGCCCATGCCGGCATGCTT CCGCCGCCAAGGAGATTTCA
Downstream 100 bases:
>100_bases GCGGCCGCGGTTTTCCGGCGCGGCCGCAATCGCCAAAGACGTTCGCAAACTAGCTGTTCTGCTGCGCCCACGGCGCGCTC CGCCGCTGCGGCGTGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSFSSVPFFITFAENPELAICAEDSIKGARLVLKPFKNNLLALFNVDFVQGLFGLATSGNQLVIGAENITLGAPLALQLL QPESSKLQRWDIFSAPGNIVSAADSCLAFGYRLRTEPPLQLTELNAPPFPQWIFLPFTTTQRGILESAV
Sequences:
>Translated_149_residues MSFSSVPFFITFAENPELAICAEDSIKGARLVLKPFKNNLLALFNVDFVQGLFGLATSGNQLVIGAENITLGAPLALQLL QPESSKLQRWDIFSAPGNIVSAADSCLAFGYRLRTEPPLQLTELNAPPFPQWIFLPFTTTQRGILESAV >Mature_148_residues SFSSVPFFITFAENPELAICAEDSIKGARLVLKPFKNNLLALFNVDFVQGLFGLATSGNQLVIGAENITLGAPLALQLLQ PESSKLQRWDIFSAPGNIVSAADSCLAFGYRLRTEPPLQLTELNAPPFPQWIFLPFTTTQRGILESAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16243; Mature: 16112
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSSVPFFITFAENPELAICAEDSIKGARLVLKPFKNNLLALFNVDFVQGLFGLATSGN CCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCCCC QLVIGAENITLGAPLALQLLQPESSKLQRWDIFSAPGNIVSAADSCLAFGYRLRTEPPLQ EEEEECCCEEECCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCEEECCCCCCE LTELNAPPFPQWIFLPFTTTQRGILESAV EEECCCCCCCCEEEEEECCCCCCHHHCCC >Mature Secondary Structure SFSSVPFFITFAENPELAICAEDSIKGARLVLKPFKNNLLALFNVDFVQGLFGLATSGN CCCCCCEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCCCC QLVIGAENITLGAPLALQLLQPESSKLQRWDIFSAPGNIVSAADSCLAFGYRLRTEPPLQ EEEEECCCEEECCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCEEECCCCCCE LTELNAPPFPQWIFLPFTTTQRGILESAV EEECCCCCCCCEEEEEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA