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The map label for this gene is ygiV [H]

Identifier: 34499596

GI number: 34499596

Start: 4480763

End: 4481623

Strand: Reverse

Name: ygiV [H]

Synonym: CV_4141

Alternate gene names: 34499596

Gene position: 4481623-4480763 (Counterclockwise)

Preceding gene: 34499597

Following gene: 34499595

Centisome position: 94.33

GC content: 65.27

Gene sequence:

>861_bases
ATGGACAAGGCGGACCGCTATGCGCGGCGTTTCGAAAAAGTGTTGGACTACATCGCCAGCCACCTGGACCAGCCGCTGGA
CGTAGAGCGGCTGAGCCAGGTGGCCCATTTCTCGCGCTTCCATTTCCACCGTCAGTTTTCAGCGTACCTGGGCGTCGGCG
TGGCCCGCTACATCCTGATGCAGCGGCTGCGCAGGGCGTCCTACTGGCTGGCGTTCCAGCCGCAGCGCAAGATCACCGCC
ATCGCGCTGGACTGCGGTTTTGACAATCCCGAGACGTTTTCGCGCGCTTTCCGGCAGGCGCTGGGCCGTTCGCCCAGCGA
ATTCCGGCGCCGTCCGGACTGGCCGGACTGGCATGCGCGGATGACGCCTCCCGTCAGAGAAAGAGTGGCAAGCATGGAAG
TCAACATCGTCACCGTCGAGCCCGTCATGGTGGCGGCCCTGGAGCATCTGGGGCCGCCGGACCGGGTCAACGACAGCGCG
CAGCGCTTCATCGCCTGGCGCAAGGAGAGCGGCCTGTCGCCGGTCGCCAGCAGCCAGACTTACGGCATCGCCTACGACAA
TCCGGAAACCAGCGAGCCGCAACGATTCCGATTCGACATCTGCGGCAGCGTCGCGGGGCCTGTGCCGGCCAATCCTCAAG
GCGTGATCGTCAAACAGATTCCGGGCGGGCGCTGCGCGGTGGCGCGCCACCGAGGATCGCACCATGACCTGGGCGACACG
ATCTGGCACCTGTACCGGGAGTGGCTGCCGGCCAGCGGCGAGACGCTGCGGGATTTTCCGGTGTATTTCCACTACCTGAA
CCTGGCCAGCGACACGCCGGAGCATTTGCTGCTGACCGATGTGCATCTGCCCTTGCGCTGA

Upstream 100 bases:

>100_bases
GGAACGCCGAGCGCCGCGCTTTGCGCGGCGTCGATTCGAGCAAGCCGCGTCAAGAATGTGGCGGCGCGTTCCGGCATAGT
GGCCGCCATGGAGGACGAGC

Downstream 100 bases:

>100_bases
TGCGTTTGGGACCGGCAGCGGTGCGGAGCCGGATCCGCTAAGCTGAAAGGATCAAGCAAACGTCCATTTGAGCGCCGCCG
CCAGGCGGCGCAGCCATCCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MDKADRYARRFEKVLDYIASHLDQPLDVERLSQVAHFSRFHFHRQFSAYLGVGVARYILMQRLRRASYWLAFQPQRKITA
IALDCGFDNPETFSRAFRQALGRSPSEFRRRPDWPDWHARMTPPVRERVASMEVNIVTVEPVMVAALEHLGPPDRVNDSA
QRFIAWRKESGLSPVASSQTYGIAYDNPETSEPQRFRFDICGSVAGPVPANPQGVIVKQIPGGRCAVARHRGSHHDLGDT
IWHLYREWLPASGETLRDFPVYFHYLNLASDTPEHLLLTDVHLPLR

Sequences:

>Translated_286_residues
MDKADRYARRFEKVLDYIASHLDQPLDVERLSQVAHFSRFHFHRQFSAYLGVGVARYILMQRLRRASYWLAFQPQRKITA
IALDCGFDNPETFSRAFRQALGRSPSEFRRRPDWPDWHARMTPPVRERVASMEVNIVTVEPVMVAALEHLGPPDRVNDSA
QRFIAWRKESGLSPVASSQTYGIAYDNPETSEPQRFRFDICGSVAGPVPANPQGVIVKQIPGGRCAVARHRGSHHDLGDT
IWHLYREWLPASGETLRDFPVYFHYLNLASDTPEHLLLTDVHLPLR
>Mature_286_residues
MDKADRYARRFEKVLDYIASHLDQPLDVERLSQVAHFSRFHFHRQFSAYLGVGVARYILMQRLRRASYWLAFQPQRKITA
IALDCGFDNPETFSRAFRQALGRSPSEFRRRPDWPDWHARMTPPVRERVASMEVNIVTVEPVMVAALEHLGPPDRVNDSA
QRFIAWRKESGLSPVASSQTYGIAYDNPETSEPQRFRFDICGSVAGPVPANPQGVIVKQIPGGRCAVARHRGSHHDLGDT
IWHLYREWLPASGETLRDFPVYFHYLNLASDTPEHLLLTDVHLPLR

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=155, Percent_Identity=50.9677419354839, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1790857, Length=180, Percent_Identity=29.4444444444444, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790497, Length=101, Percent_Identity=31.6831683168317, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 32856; Mature: 32856

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKADRYARRFEKVLDYIASHLDQPLDVERLSQVAHFSRFHFHRQFSAYLGVGVARYILM
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLRRASYWLAFQPQRKITAIALDCGFDNPETFSRAFRQALGRSPSEFRRRPDWPDWHAR
HHHHHHHHEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCC
MTPPVRERVASMEVNIVTVEPVMVAALEHLGPPDRVNDSAQRFIAWRKESGLSPVASSQT
CCCHHHHHHHHHEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
YGIAYDNPETSEPQRFRFDICGSVAGPVPANPQGVIVKQIPGGRCAVARHRGSHHDLGDT
EEEEECCCCCCCCHHEEHHHHCCCCCCCCCCCCCEEEEECCCCCEEHHHCCCCCCCHHHH
IWHLYREWLPASGETLRDFPVYFHYLNLASDTPEHLLLTDVHLPLR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MDKADRYARRFEKVLDYIASHLDQPLDVERLSQVAHFSRFHFHRQFSAYLGVGVARYILM
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLRRASYWLAFQPQRKITAIALDCGFDNPETFSRAFRQALGRSPSEFRRRPDWPDWHAR
HHHHHHHHEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCC
MTPPVRERVASMEVNIVTVEPVMVAALEHLGPPDRVNDSAQRFIAWRKESGLSPVASSQT
CCCHHHHHHHHHEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
YGIAYDNPETSEPQRFRFDICGSVAGPVPANPQGVIVKQIPGGRCAVARHRGSHHDLGDT
EEEEECCCCCCCCHHEEHHHHCCCCCCCCCCCCCEEEEECCCCCEEHHHCCCCCCCHHHH
IWHLYREWLPASGETLRDFPVYFHYLNLASDTPEHLLLTDVHLPLR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]