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The map label for this gene is aidB [H]

Identifier: 34499594

GI number: 34499594

Start: 4479897

End: 4480283

Strand: Reverse

Name: aidB [H]

Synonym: CV_4139

Alternate gene names: 34499594

Gene position: 4480283-4479897 (Counterclockwise)

Preceding gene: 34499595

Following gene: 34499591

Centisome position: 94.3

GC content: 66.41

Gene sequence:

>387_bases
ATGACCCAGGCGGCGATCCCGTTGTCGAAGCGGGAGCCGGTGTTGTGGGCGCAGCAGCGCGACGACGGCCCCGCCTGCTT
CTATGTTCCGCGCTGGCGGCCGGACGGCAGCCGCAACGCGGTGGCGATGCAGCGCTTGAAGGACAAGGTGGGCAACTGCA
GCAACGCCAGCAGCGAGGTGGAGTCCCATGATGCCTGGGGCGTTTTGATCGGTGATCCCGGCCGCGGCATCCCCGCCATC
ATCGAGATGGCCACCTACGCCCGGTTCAATTGCGTGATCGGCAGCGCGGCACTGGCGCGCCAGGTCGTGATGCTGGATCC
GCATTGCCAGACCATGGGCCTGTACGGTCCGGAGTGCTGGACCTATACGCTGCCCATTTCGTGCTGA

Upstream 100 bases:

>100_bases
GGGCTGGTGTCGCTGCTGTTCGACAGCGAGCGTTTCGGTCGCTGAACGGCTTTTCTCGCCTGCATGGCCAGGCGGGGCGG
GAACCTGGCATCCCGCCACC

Downstream 100 bases:

>100_bases
AACGCCGCGCCTGCGGCACGCCGCAGCGGCGGAGCGCGCCGTGGGCGCAGCAGAACAGCTAGTTTGCGAACGTCTTTGGC
GATTGCGGCCGCGCCGGAAA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTQAAIPLSKREPVLWAQQRDDGPACFYVPRWRPDGSRNAVAMQRLKDKVGNCSNASSEVESHDAWGVLIGDPGRGIPAI
IEMATYARFNCVIGSAALARQVVMLDPHCQTMGLYGPECWTYTLPISC

Sequences:

>Translated_128_residues
MTQAAIPLSKREPVLWAQQRDDGPACFYVPRWRPDGSRNAVAMQRLKDKVGNCSNASSEVESHDAWGVLIGDPGRGIPAI
IEMATYARFNCVIGSAALARQVVMLDPHCQTMGLYGPECWTYTLPISC
>Mature_127_residues
TQAAIPLSKREPVLWAQQRDDGPACFYVPRWRPDGSRNAVAMQRLKDKVGNCSNASSEVESHDAWGVLIGDPGRGIPAII
EMATYARFNCVIGSAALARQVVMLDPHCQTMGLYGPECWTYTLPISC

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI87082384, Length=101, Percent_Identity=48.5148514851485, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 14054; Mature: 13923

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAAIPLSKREPVLWAQQRDDGPACFYVPRWRPDGSRNAVAMQRLKDKVGNCSNASSEV
CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
ESHDAWGVLIGDPGRGIPAIIEMATYARFNCVIGSAALARQVVMLDPHCQTMGLYGPECW
CCCCCCEEEECCCCCCHHHHHHHHHHHHEEEEECCHHHHCEEEEECCCCCCCCCCCCCCE
TYTLPISC
EEEEECCC
>Mature Secondary Structure 
TQAAIPLSKREPVLWAQQRDDGPACFYVPRWRPDGSRNAVAMQRLKDKVGNCSNASSEV
CCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
ESHDAWGVLIGDPGRGIPAIIEMATYARFNCVIGSAALARQVVMLDPHCQTMGLYGPECW
CCCCCCEEEECCCCCCHHHHHHHHHHHHEEEEECCHHHHCEEEEECCCCCCCCCCCCCCE
TYTLPISC
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]