| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499565
Identifier: 34499565
GI number: 34499565
Start: 4451303
End: 4451542
Strand: Reverse
Name: 34499565
Synonym: CV_4110
Alternate gene names: NA
Gene position: 4451542-4451303 (Counterclockwise)
Preceding gene: 34499567
Following gene: 34499564
Centisome position: 93.7
GC content: 60.83
Gene sequence:
>240_bases ATGGCCGCCCCGCATTTTCTCAGCGACAGCCAGCTGCAGCAGCTGGCGCCGCAATTGCAGCAATATCTGTCCGAACAGCT GGGGCTGGAGATCGGCAATTTCGACGCCCGCTTCCTGCTGGACTTCATCGCCGAGAAGGTCGGCAGAGACATTTACAACA AGGCGCTGCAGGATGCGCAGACCGCGTTGTCGGCCAGGATGGAAAGCCTGCAGGCGGCGATCTGGGAACTGGAACGCTAG
Upstream 100 bases:
>100_bases CGGGTCTGGTGAGCCTGGGGCGCGACTGGTCGCGTTCTTGAGCGGGCGTCGCCAAGGCCGCGCTTCTGGGCGATAATTGC GTCTTTTGCCGGAGACGCCG
Downstream 100 bases:
>100_bases CCGCGCTGCCCGCGGCGGCGGCATTGAGGTTACAATCGGGCTTCCCTTCCTTTTTTGACTTGCGGTGTCGATGCTCTACT TGCGCTTGATGTTGAGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MAAPHFLSDSQLQQLAPQLQQYLSEQLGLEIGNFDARFLLDFIAEKVGRDIYNKALQDAQTALSARMESLQAAIWELER
Sequences:
>Translated_79_residues MAAPHFLSDSQLQQLAPQLQQYLSEQLGLEIGNFDARFLLDFIAEKVGRDIYNKALQDAQTALSARMESLQAAIWELER >Mature_78_residues AAPHFLSDSQLQQLAPQLQQYLSEQLGLEIGNFDARFLLDFIAEKVGRDIYNKALQDAQTALSARMESLQAAIWELER
Specific function: Unknown
COG id: COG5460
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8966; Mature: 8835
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPHFLSDSQLQQLAPQLQQYLSEQLGLEIGNFDARFLLDFIAEKVGRDIYNKALQDAQ CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TALSARMESLQAAIWELER HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAPHFLSDSQLQQLAPQLQQYLSEQLGLEIGNFDARFLLDFIAEKVGRDIYNKALQDAQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TALSARMESLQAAIWELER HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA