Click here to switch to the map view.

The map label for this gene is yhbV [H]

Identifier: 34499540

GI number: 34499540

Start: 4422354

End: 4423277

Strand: Direct

Name: yhbV [H]

Synonym: CV_4085

Alternate gene names: 34499540

Gene position: 4422354-4423277 (Clockwise)

Preceding gene: 34499539

Following gene: 34499541

Centisome position: 93.08

GC content: 69.37

Gene sequence:

>924_bases
ATGAATCCCATTCCCCTGAAACTGTCGCTCGGCCCGGTGCTGTTCTTCTGGAGCCGCGACGACATCCTCCGTTTTTACGC
CGAAGCCGCCGATTGGCCGCTGGACACCCTGTATCTGGGCGAAGTGGTGTGCGGCCGCCGCCAGCAGCTGCGCGGCCAGG
ACTGGATTTCGCTGGCCGCCGACCTTGGCGCGACCGGCCGCGAAGTCGTGCTGTCCTGCCAGGCGCTGATTGAGAGCGAA
TCCGACCTCAAGCGGCTGCGCAAGATGGTAGACAACGGCCAGGTGGCCATCGAGGCCAACGACCTCGGCGCGGTGCGGCT
GGCCAGCGAGAAGAAGCTGCCCTTCGTCGCCGGCACCCACCTCAACATCTACAACGCCGACACGCTGGCGCTGATGCGCC
GCTTGGGCGCCTACCGCTGGCTGCCGCCGGTGGAAATGGGCCGCGACACGCTGGCCGCGCTGCTGGCTGCCGCCCGGAGC
CAGCAACTGGAGATCGACACCGAGGTGTTCGCCTGGGGGCGGCTGCCGCTGGCGCTGTCTTCCCGCTGCTTCACCGCCCG
CCACTACAACCTGAACAAGGACGACTGCCAGTTCCGCTGCCTGGAGCACCCAGACGGCCTCAGGCTGGACACCCGCGAAG
GCCAGCACTTCCTGGCCATCAACGGCATCCAGACCATGTCGGACGGCTGCCAAGCGCTGCTGCCCCACCTGGAGGAGATG
CACGCCGCCGGCGCCAGCCGGCTGCGGATCAGCCCGCAGGCGCGAGACACCGACGCCGTAGTCCGGGCTTTCCGTCAGCG
GCTGGACGGCCTGGCCGGCGCGGATGGCTTGCTGGACGGGCTGCGCGCCCAGGCGCCCGGCGAACTCGTGGACGGCTACT
GGCGCGGCCAGGCCGGCATCCACGCCCTGGAGGAGACCCGCTGA

Upstream 100 bases:

>100_bases
CGCCTGGCAGCAGGCGCTGAGCAAGGTGGCGGAAGGACACCAGCAGACGCTGGGCGCCTACGATCGCCCGTGGAAGTGAA
CCTGCAGCATGGATATCCGC

Downstream 100 bases:

>100_bases
TGCGCGTGCCAGAACTGACCTTCCCCGCCGCCGGCGCCCGCCTGCTGTCGCGGCTGCCCGCCACCCCGCCCAGCTGGCTG
CTGGCCTCCCTGCTCAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNPIPLKLSLGPVLFFWSRDDILRFYAEAADWPLDTLYLGEVVCGRRQQLRGQDWISLAADLGATGREVVLSCQALIESE
SDLKRLRKMVDNGQVAIEANDLGAVRLASEKKLPFVAGTHLNIYNADTLALMRRLGAYRWLPPVEMGRDTLAALLAAARS
QQLEIDTEVFAWGRLPLALSSRCFTARHYNLNKDDCQFRCLEHPDGLRLDTREGQHFLAINGIQTMSDGCQALLPHLEEM
HAAGASRLRISPQARDTDAVVRAFRQRLDGLAGADGLLDGLRAQAPGELVDGYWRGQAGIHALEETR

Sequences:

>Translated_307_residues
MNPIPLKLSLGPVLFFWSRDDILRFYAEAADWPLDTLYLGEVVCGRRQQLRGQDWISLAADLGATGREVVLSCQALIESE
SDLKRLRKMVDNGQVAIEANDLGAVRLASEKKLPFVAGTHLNIYNADTLALMRRLGAYRWLPPVEMGRDTLAALLAAARS
QQLEIDTEVFAWGRLPLALSSRCFTARHYNLNKDDCQFRCLEHPDGLRLDTREGQHFLAINGIQTMSDGCQALLPHLEEM
HAAGASRLRISPQARDTDAVVRAFRQRLDGLAGADGLLDGLRAQAPGELVDGYWRGQAGIHALEETR
>Mature_307_residues
MNPIPLKLSLGPVLFFWSRDDILRFYAEAADWPLDTLYLGEVVCGRRQQLRGQDWISLAADLGATGREVVLSCQALIESE
SDLKRLRKMVDNGQVAIEANDLGAVRLASEKKLPFVAGTHLNIYNADTLALMRRLGAYRWLPPVEMGRDTLAALLAAARS
QQLEIDTEVFAWGRLPLALSSRCFTARHYNLNKDDCQFRCLEHPDGLRLDTREGQHFLAINGIQTMSDGCQALLPHLEEM
HAAGASRLRISPQARDTDAVVRAFRQRLDGLAGADGLLDGLRAQAPGELVDGYWRGQAGIHALEETR

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=298, Percent_Identity=40.6040268456376, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 34084; Mature: 34084

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIPLKLSLGPVLFFWSRDDILRFYAEAADWPLDTLYLGEVVCGRRQQLRGQDWISLAA
CCCCCEEEECCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHH
DLGATGREVVLSCQALIESESDLKRLRKMVDNGQVAIEANDLGAVRLASEKKLPFVAGTH
HCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCE
LNIYNADTLALMRRLGAYRWLPPVEMGRDTLAALLAAARSQQLEIDTEVFAWGRLPLALS
EEEECHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHCCCCEEECHHEEEECCCCHHHH
SRCFTARHYNLNKDDCQFRCLEHPDGLRLDTREGQHFLAINGIQTMSDGCQALLPHLEEM
CCEEEEECCCCCCCCCEEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH
HAAGASRLRISPQARDTDAVVRAFRQRLDGLAGADGLLDGLRAQAPGELVDGYWRGQAGI
HHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCC
HALEETR
CHHHCCC
>Mature Secondary Structure
MNPIPLKLSLGPVLFFWSRDDILRFYAEAADWPLDTLYLGEVVCGRRQQLRGQDWISLAA
CCCCCEEEECCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHH
DLGATGREVVLSCQALIESESDLKRLRKMVDNGQVAIEANDLGAVRLASEKKLPFVAGTH
HCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCE
LNIYNADTLALMRRLGAYRWLPPVEMGRDTLAALLAAARSQQLEIDTEVFAWGRLPLALS
EEEECHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHCCCCEEECHHEEEECCCCHHHH
SRCFTARHYNLNKDDCQFRCLEHPDGLRLDTREGQHFLAINGIQTMSDGCQALLPHLEEM
CCEEEEECCCCCCCCCEEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH
HAAGASRLRISPQARDTDAVVRAFRQRLDGLAGADGLLDGLRAQAPGELVDGYWRGQAGI
HHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCC
HALEETR
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]