| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cls [H]
Identifier: 34499494
GI number: 34499494
Start: 4369548
End: 4371065
Strand: Direct
Name: cls [H]
Synonym: CV_4039
Alternate gene names: 34499494
Gene position: 4369548-4371065 (Clockwise)
Preceding gene: 34499472
Following gene: 34499495
Centisome position: 91.97
GC content: 66.8
Gene sequence:
>1518_bases ATGAGCAAAGACGAGCAGTCGCAACAAACCCTGCAATTCGTCCGCCAGCTGGCGGAACAGGCGCTTTCGCGCTCCGCCGG CGCGCCGCTGATGGCCGGAAACCGAGTGCGGCTGCTGTACGACAGCGTGGAAAACTTTCCCGCCTGGGAGAACGCGCTCT CAGAATGCCGGGATTCCATCTTTATCGAAATGTATATATTCGCCAATGACCAATTTGGCTTGAAAATCCGTAATATCCTT ATAGAAAAAGCAAAACAAGGCATCCAAGTTTGCCTGTTGTATGACTGGCTGGGCAGCTGGCGCGCGCACTTGTCCGGCTT CCTCAAGCCGCTGCAGGAAGCCGGAGCCGAGGTGCGCGCCTACCATCCCCCCAGCCTGGGCGGCGGGCTCACGCTGTTGG GGCGCAACCACCGCAAGATGATCATCGTCGACCGGCAAGAGCTGTTCGTTTCCGGGCTGTGCATCAGCCAGAGCTGGCAA GGCCAGCCTGAAAAGGGACTGGCGCCATGGCGCGACACCGGCCTGGCGCTGAGCGGCCCGCTGCTGGCGCCGGCGCTGGC GGCCTTTGCCGACAGCTGGGCCAGTTGCGGCGAGCCGCTGGACGCGCGCTGGCTGGTTCCGGCCGACACGCAGCCCGCCG GCGAGGCCGCCGCGAGGTTGATCGCCACCACGCCTTCCACCGCGCGGATGATGCGGCTGGATCTGTTGGTGGCCAGCTTC GCCCGCCGCACGCTGTGGCTGACCGACGCCTACTTCATGGCCACCAGCCTCTATCTGTCGGCGTTGAAGCAGGCGGCGCG GGACGGCGTCGACGTGCGCCTCCTGGTGCCGCGCTCCAGCGACATCCGCTGGATCGCCGCCGTGTCCCGCACCCAGTACC GCCCGCTGCTGGAAGCCGGGGTGCGGGTGTTCGAGTGGAACGGGCCGATGATCCACGCCAAAACCGCTGTCGCCGACGGC CGCTGGGCCCGCATCGGCTCCACCAACCTCAATCTGTCCAGCTGGCTGGTCAACCGCGAACTGGACATCGCGCTGGAGGA CGAGGGCCTGGCCGGAGAACTCGCGGAACGCTTCCTGCAGGACCTGGAACAGTCGACCGAGATCGTGCTGCGCCAGGAGC GGCGCAAGCCGGTGCCGCGGCCGGTCAGCAAGCAGGAACGGCGGATGCGCGGCACGCCCAAGGAAATGGCGCTCAGCGGC GCCAGCGCGGCGGCGCGCCAGGCGATGCGCATCGGCGACGCGCTGGGCTCCGTGGTGCGCGGCAGCCGCATGGTGGAAAG CAGCGAGGCCCCGGCCTTCCTCAGCATAGGCGTCGCCCTGTGCCTGCTGGCGCTGGCCATCGCCTACTTTCCGTGGCTGG CGGCCGCGCCGTTGGTCGCGCTGCTGGCCGCGGGCGGCCTGGCCGTGGTGTTCAAGGCCTGCGGGCTATATCTGGAAAAA CGGAAGAAAAAACAACAGTCGAGGCTGGCGGAGTGCAGCAGCGGAAGCGACAAGCCGACGCCGGACGACTCTCAATGA
Upstream 100 bases:
>100_bases AAAATTTTCAAAAATACGACAGTTTTTCCTACTCAAAATCAGATACAAAGAAGCCATTACGGCAATATTTTGTATTTTGT TAGACAAAATTCAAAAAATC
Downstream 100 bases:
>100_bases AAACAGCCGCTTAGCATATGGGCGCAGCTGTTTACGGCGCGCCAGCCGCCCTGGCCGGCGCCGGCAGATAGTCCTGATCG CGATTTTTCCGCGATCCATT
Product: phosphatidylglycerol phosphate synthetase
Products: CMP; 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSKDEQSQQTLQFVRQLAEQALSRSAGAPLMAGNRVRLLYDSVENFPAWENALSECRDSIFIEMYIFANDQFGLKIRNIL IEKAKQGIQVCLLYDWLGSWRAHLSGFLKPLQEAGAEVRAYHPPSLGGGLTLLGRNHRKMIIVDRQELFVSGLCISQSWQ GQPEKGLAPWRDTGLALSGPLLAPALAAFADSWASCGEPLDARWLVPADTQPAGEAAARLIATTPSTARMMRLDLLVASF ARRTLWLTDAYFMATSLYLSALKQAARDGVDVRLLVPRSSDIRWIAAVSRTQYRPLLEAGVRVFEWNGPMIHAKTAVADG RWARIGSTNLNLSSWLVNRELDIALEDEGLAGELAERFLQDLEQSTEIVLRQERRKPVPRPVSKQERRMRGTPKEMALSG ASAAARQAMRIGDALGSVVRGSRMVESSEAPAFLSIGVALCLLALAIAYFPWLAAAPLVALLAAGGLAVVFKACGLYLEK RKKKQQSRLAECSSGSDKPTPDDSQ
Sequences:
>Translated_505_residues MSKDEQSQQTLQFVRQLAEQALSRSAGAPLMAGNRVRLLYDSVENFPAWENALSECRDSIFIEMYIFANDQFGLKIRNIL IEKAKQGIQVCLLYDWLGSWRAHLSGFLKPLQEAGAEVRAYHPPSLGGGLTLLGRNHRKMIIVDRQELFVSGLCISQSWQ GQPEKGLAPWRDTGLALSGPLLAPALAAFADSWASCGEPLDARWLVPADTQPAGEAAARLIATTPSTARMMRLDLLVASF ARRTLWLTDAYFMATSLYLSALKQAARDGVDVRLLVPRSSDIRWIAAVSRTQYRPLLEAGVRVFEWNGPMIHAKTAVADG RWARIGSTNLNLSSWLVNRELDIALEDEGLAGELAERFLQDLEQSTEIVLRQERRKPVPRPVSKQERRMRGTPKEMALSG ASAAARQAMRIGDALGSVVRGSRMVESSEAPAFLSIGVALCLLALAIAYFPWLAAAPLVALLAAGGLAVVFKACGLYLEK RKKKQQSRLAECSSGSDKPTPDDSQ >Mature_504_residues SKDEQSQQTLQFVRQLAEQALSRSAGAPLMAGNRVRLLYDSVENFPAWENALSECRDSIFIEMYIFANDQFGLKIRNILI EKAKQGIQVCLLYDWLGSWRAHLSGFLKPLQEAGAEVRAYHPPSLGGGLTLLGRNHRKMIIVDRQELFVSGLCISQSWQG QPEKGLAPWRDTGLALSGPLLAPALAAFADSWASCGEPLDARWLVPADTQPAGEAAARLIATTPSTARMMRLDLLVASFA RRTLWLTDAYFMATSLYLSALKQAARDGVDVRLLVPRSSDIRWIAAVSRTQYRPLLEAGVRVFEWNGPMIHAKTAVADGR WARIGSTNLNLSSWLVNRELDIALEDEGLAGELAERFLQDLEQSTEIVLRQERRKPVPRPVSKQERRMRGTPKEMALSGA SAAARQAMRIGDALGSVVRGSRMVESSEAPAFLSIGVALCLLALAIAYFPWLAAAPLVALLAAGGLAVVFKACGLYLEKR KKKQQSRLAECSSGSDKPTPDDSQ
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787007, Length=334, Percent_Identity=29.6407185628743, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1787502, Length=343, Percent_Identity=25.6559766763848, Blast_Score=113, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.5
Molecular weight: Translated: 55444; Mature: 55312
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDEQSQQTLQFVRQLAEQALSRSAGAPLMAGNRVRLLYDSVENFPAWENALSECRDSI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCE FIEMYIFANDQFGLKIRNILIEKAKQGIQVCLLYDWLGSWRAHLSGFLKPLQEAGAEVRA EEEEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEE YHPPSLGGGLTLLGRNHRKMIIVDRQELFVSGLCISQSWQGQPEKGLAPWRDTGLALSGP ECCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEECCH LLAPALAAFADSWASCGEPLDARWLVPADTQPAGEAAARLIATTPSTARMMRLDLLVASF HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH ARRTLWLTDAYFMATSLYLSALKQAARDGVDVRLLVPRSSDIRWIAAVSRTQYRPLLEAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHCHHHHHCC VRVFEWNGPMIHAKTAVADGRWARIGSTNLNLSSWLVNRELDIALEDEGLAGELAERFLQ CEEEECCCCEEEEEEEECCCCEEEECCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHH DLEQSTEIVLRQERRKPVPRPVSKQERRMRGTPKEMALSGASAAARQAMRIGDALGSVVR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH GSRMVESSEAPAFLSIGVALCLLALAIAYFPWLAAAPLVALLAAGGLAVVFKACGLYLEK CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RKKKQQSRLAECSSGSDKPTPDDSQ HHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SKDEQSQQTLQFVRQLAEQALSRSAGAPLMAGNRVRLLYDSVENFPAWENALSECRDSI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCE FIEMYIFANDQFGLKIRNILIEKAKQGIQVCLLYDWLGSWRAHLSGFLKPLQEAGAEVRA EEEEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEE YHPPSLGGGLTLLGRNHRKMIIVDRQELFVSGLCISQSWQGQPEKGLAPWRDTGLALSGP ECCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEECCH LLAPALAAFADSWASCGEPLDARWLVPADTQPAGEAAARLIATTPSTARMMRLDLLVASF HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH ARRTLWLTDAYFMATSLYLSALKQAARDGVDVRLLVPRSSDIRWIAAVSRTQYRPLLEAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHCHHHHHCC VRVFEWNGPMIHAKTAVADGRWARIGSTNLNLSSWLVNRELDIALEDEGLAGELAERFLQ CEEEECCCCEEEEEEEECCCCEEEECCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHH DLEQSTEIVLRQERRKPVPRPVSKQERRMRGTPKEMALSGASAAARQAMRIGDALGSVVR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH GSRMVESSEAPAFLSIGVALCLLALAIAYFPWLAAAPLVALLAAGGLAVVFKACGLYLEK CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RKKKQQSRLAECSSGSDKPTPDDSQ HHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CDPdiacylglycerol; sn-glycerol 3-phosphate
Specific reaction: CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]