Click here to switch to the map view.

The map label for this gene is cyoC [H]

Identifier: 34499449

GI number: 34499449

Start: 4321353

End: 4321964

Strand: Reverse

Name: cyoC [H]

Synonym: CV_3994

Alternate gene names: 34499449

Gene position: 4321964-4321353 (Counterclockwise)

Preceding gene: 34499450

Following gene: 34499448

Centisome position: 90.97

GC content: 61.6

Gene sequence:

>612_bases
ATGACGACTTATGTAAAAGAAGCGCACGCCGCGCACGACGACCACGAGCACCACGACAGCGGTTCGCAAACCGTGCTGGG
CTTCTGGTTCTACCTGATGACCGACTGCATCCTGTTCGCGACGGCGTTCGCGACCTACGCAGTCCTGTTCCGCAACGTGG
CGGAAGGCGTGTCCGGCAAGGACATCTTCGATCTGCAATACGTGCTGGTGGAAACCGCGGCCCTGCTGCTGTCCTCCATC
ACCTACGGCTTCGCGATGATCGCCGGCCACAAGGGCAACAAGTCTGCCGTGCTCGGTTGGCTGGCGGTGACCTTCCTGTT
CGGCGCCGCCTTCATCGGCATGGAAATCAATGAATTCCATCATTTGATCTCCGAGGGCCACGGTCCGCAGAAGAGCGCCT
TCCTGTCGGCCTTCTTCGGCCTGGTGGGCCTGCACGGCCTGCACGTGACCGCCGGCCTGCTGTGGATGGGCGTGATGATG
GCCGAAGTGGCCAAGACCGGCCTGACCGGCCGCGCCATGACCCGCCTGAACTGCCTGTCGCTGTTCTGGCACTTCCTCGA
CATCGTGTGGATTTGCGTGTTCACCGTCGTCTACCTGAAAGGAGCCATGTGA

Upstream 100 bases:

>100_bases
GAAGCTGGGCATCGACGTCGACAACTACACCGAGCGTGATCCGGCCCAGCCGAAAAAGGCTGCGCGTCCGACCACTACCG
CGTAAGGGGTTGAACCTGAC

Downstream 100 bases:

>100_bases
TGAGCCACGCGCATGACAACGCCAGCCACGGCACCGTGAAGAGCTACATGGTCGGCTTCGTGCTGTCCGTGATCCTCACC
GCCATCCCGTTCTGGATGGT

Product: cytochrome o ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTTYVKEAHAAHDDHEHHDSGSQTVLGFWFYLMTDCILFATAFATYAVLFRNVAEGVSGKDIFDLQYVLVETAALLLSSI
TYGFAMIAGHKGNKSAVLGWLAVTFLFGAAFIGMEINEFHHLISEGHGPQKSAFLSAFFGLVGLHGLHVTAGLLWMGVMM
AEVAKTGLTGRAMTRLNCLSLFWHFLDIVWICVFTVVYLKGAM

Sequences:

>Translated_203_residues
MTTYVKEAHAAHDDHEHHDSGSQTVLGFWFYLMTDCILFATAFATYAVLFRNVAEGVSGKDIFDLQYVLVETAALLLSSI
TYGFAMIAGHKGNKSAVLGWLAVTFLFGAAFIGMEINEFHHLISEGHGPQKSAFLSAFFGLVGLHGLHVTAGLLWMGVMM
AEVAKTGLTGRAMTRLNCLSLFWHFLDIVWICVFTVVYLKGAM
>Mature_202_residues
TTYVKEAHAAHDDHEHHDSGSQTVLGFWFYLMTDCILFATAFATYAVLFRNVAEGVSGKDIFDLQYVLVETAALLLSSIT
YGFAMIAGHKGNKSAVLGWLAVTFLFGAAFIGMEINEFHHLISEGHGPQKSAFLSAFFGLVGLHGLHVTAGLLWMGVMMA
EVAKTGLTGRAMTRLNCLSLFWHFLDIVWICVFTVVYLKGAM

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=202, Percent_Identity=64.3564356435644, Blast_Score=263, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22303; Mature: 22172

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYVKEAHAAHDDHEHHDSGSQTVLGFWFYLMTDCILFATAFATYAVLFRNVAEGVSGK
CCCHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DIFDLQYVLVETAALLLSSITYGFAMIAGHKGNKSAVLGWLAVTFLFGAAFIGMEINEFH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
HLISEGHGPQKSAFLSAFFGLVGLHGLHVTAGLLWMGVMMAEVAKTGLTGRAMTRLNCLS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LFWHFLDIVWICVFTVVYLKGAM
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTYVKEAHAAHDDHEHHDSGSQTVLGFWFYLMTDCILFATAFATYAVLFRNVAEGVSGK
CCHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DIFDLQYVLVETAALLLSSITYGFAMIAGHKGNKSAVLGWLAVTFLFGAAFIGMEINEFH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
HLISEGHGPQKSAFLSAFFGLVGLHGLHVTAGLLWMGVMMAEVAKTGLTGRAMTRLNCLS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LFWHFLDIVWICVFTVVYLKGAM
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]