| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499394
Identifier: 34499394
GI number: 34499394
Start: 4259227
End: 4260024
Strand: Direct
Name: 34499394
Synonym: CV_3939
Alternate gene names: NA
Gene position: 4259227-4260024 (Clockwise)
Preceding gene: 34499393
Following gene: 34499417
Centisome position: 89.65
GC content: 63.03
Gene sequence:
>798_bases ATGACTTATGCCATGCTGGCCCCGGATTGCTTCACCGACGAACACAAAAGCTTCCTGGCCGGATTTCGCCAATCGATGGA AATGCTGTCCAGCAGCTCGAACATGATGCTGGGCGCCAAGGACATCCGCTCCCGCCACTTGGCCGCCACCGACGCCTACG CCCGGATCGTCGCGCTGGAGAGGGGCGGCGACGTCGCCGGCCGGCTGGACAGCGAAATGCCGTGCGAGGGCACCGCCCAG TTCGCCGACAGCTACGTGAGCGAAGACCTGTCCCTGATGCAGGGAGGCGAACCCGGCCGCAAGCTCGCCACGCTGAACAT CCACGAATACGCGGACGGCCTGAAGGCCCGCGTGTTCAACAAGCACCTGCTGGTCCACCACCCCAGCCGGTCCATCCTGG GCACCATCTACAGCGGCCAGGACGTGGAAATCGGCAATTTCCTCAATATCATCCCCAACTACGTGCTGGAGTTCGGCGCC GGCTGCAGCCTGGAACAGGGCTCGGCCTACAGCAGCCTGGAGGGCGTGACGCTGACCGAGTACGAGCAGGAAGTCTGCTT CCTGTTGCTGCTCAACTGGGAGTTCAAGCAGATCGCCGCCTTCATGGACAAGTACCGCCCGCGCAACGCGCCGCGCACCA CCGACTCGGTGATCAAGTGCAAGAACTACCTGTGCGAGAAGTTCGGCATCGAACAGGCCCGACTGCAGGCGCTGAAGGAA TTCCTGGTCCACCACGGCATGCACCGCAAGATCCCGCGCTCGCTGTTCAACCGGCTGATAGGCTCGAAGCGGCTCTAG
Upstream 100 bases:
>100_bases CGCCCATCAATCGCGCCGGACTTCAAAACGGCAAACGCCCCGAACGATAAGACATCGCATCGTCCCGCGCCAGCCAGGCC GCGCGAGGAAGGAAAATCCC
Downstream 100 bases:
>100_bases CCAGACTGCGCAAACATCCGCCGCCGCCGCGAGAGGCAACAAACAGGACGGTCCCATCTGGAAACGGCGGTGGAAGCTGT CGGAAACACGGGCAACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTYAMLAPDCFTDEHKSFLAGFRQSMEMLSSSSNMMLGAKDIRSRHLAATDAYARIVALERGGDVAGRLDSEMPCEGTAQ FADSYVSEDLSLMQGGEPGRKLATLNIHEYADGLKARVFNKHLLVHHPSRSILGTIYSGQDVEIGNFLNIIPNYVLEFGA GCSLEQGSAYSSLEGVTLTEYEQEVCFLLLLNWEFKQIAAFMDKYRPRNAPRTTDSVIKCKNYLCEKFGIEQARLQALKE FLVHHGMHRKIPRSLFNRLIGSKRL
Sequences:
>Translated_265_residues MTYAMLAPDCFTDEHKSFLAGFRQSMEMLSSSSNMMLGAKDIRSRHLAATDAYARIVALERGGDVAGRLDSEMPCEGTAQ FADSYVSEDLSLMQGGEPGRKLATLNIHEYADGLKARVFNKHLLVHHPSRSILGTIYSGQDVEIGNFLNIIPNYVLEFGA GCSLEQGSAYSSLEGVTLTEYEQEVCFLLLLNWEFKQIAAFMDKYRPRNAPRTTDSVIKCKNYLCEKFGIEQARLQALKE FLVHHGMHRKIPRSLFNRLIGSKRL >Mature_264_residues TYAMLAPDCFTDEHKSFLAGFRQSMEMLSSSSNMMLGAKDIRSRHLAATDAYARIVALERGGDVAGRLDSEMPCEGTAQF ADSYVSEDLSLMQGGEPGRKLATLNIHEYADGLKARVFNKHLLVHHPSRSILGTIYSGQDVEIGNFLNIIPNYVLEFGAG CSLEQGSAYSSLEGVTLTEYEQEVCFLLLLNWEFKQIAAFMDKYRPRNAPRTTDSVIKCKNYLCEKFGIEQARLQALKEF LVHHGMHRKIPRSLFNRLIGSKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29756; Mature: 29624
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYAMLAPDCFTDEHKSFLAGFRQSMEMLSSSSNMMLGAKDIRSRHLAATDAYARIVALE CCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHEEEEE RGGDVAGRLDSEMPCEGTAQFADSYVSEDLSLMQGGEPGRKLATLNIHEYADGLKARVFN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH KHLLVHHPSRSILGTIYSGQDVEIGNFLNIIPNYVLEFGAGCSLEQGSAYSSLEGVTLTE CEEEEECCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHH YEQEVCFLLLLNWEFKQIAAFMDKYRPRNAPRTTDSVIKCKNYLCEKFGIEQARLQALKE HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH FLVHHGMHRKIPRSLFNRLIGSKRL HHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TYAMLAPDCFTDEHKSFLAGFRQSMEMLSSSSNMMLGAKDIRSRHLAATDAYARIVALE CCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHEEEEE RGGDVAGRLDSEMPCEGTAQFADSYVSEDLSLMQGGEPGRKLATLNIHEYADGLKARVFN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH KHLLVHHPSRSILGTIYSGQDVEIGNFLNIIPNYVLEFGAGCSLEQGSAYSSLEGVTLTE CEEEEECCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHH YEQEVCFLLLLNWEFKQIAAFMDKYRPRNAPRTTDSVIKCKNYLCEKFGIEQARLQALKE HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH FLVHHGMHRKIPRSLFNRLIGSKRL HHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA