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The map label for this gene is natC [H]

Identifier: 34499380

GI number: 34499380

Start: 4239765

End: 4241099

Strand: Direct

Name: natC [H]

Synonym: CV_3925

Alternate gene names: 34499380

Gene position: 4239765-4241099 (Clockwise)

Preceding gene: 34499379

Following gene: 34499381

Centisome position: 89.24

GC content: 67.27

Gene sequence:

>1335_bases
ATGAAGAACCACCGCCTCCCCCTCATCGCCGCCCTGCTGATGTTCGGCGCCGCGCTGCCCGCCCAGGCCTTCGACCTGGT
CGGCGCCTGGCAGGCCGCCCGCGACTACAACGCCGATTTCGCCGCCGCCCGCGCCCAGCGCGAGGCCGGCCAGGAAAAAG
CGGTGCAGGGCCGCAGCCAGTTGCTGCCGCAGGTCAGCGTCACCGGCAATTACGCCTACAATAATCCGTTGCAGCCGTCG
CAGGGCATCGGCGCCTCCGGCAACCTCGTCGCCAACAAGCCCTATGAGACCCACGGCTACAACGTCGGCCTGCAGCAGCC
GCTGTTCGACGCCGGCAAGTACACCGGCTACCAGAAGGGCAAGATAGGCACCGAGCTGGCAGACACCACCTTCGACGCCG
CCGAGCAGCAACTGATCCTGGACATCGCCCAGGCCTACTTCGACGTGCTACGCGCCCGCGACACGCTGGCCGCCACCCGC
GCCAGCAAGAAGACCTACCAGAACCTGCTGGAGCAGGCCAGGACCGCGTTCGAGGTCGGCACCGCCACCATTACCGACAC
CCATGAGGCGCAGGCCGGCTACGACGGCGCAGTGGCGCAGGAAATCAGCGACGCCAACAATCTGGAACTGGCCGAAAACA
ATCTGAAGCGCCTGACCGGCCTGGAGCCGTCCGGCATCCAGACCGTGCGCGACCAGCTGCCGCTGCTTCCGCCCAAGCCG
GCCGGCCTGGACGCCTGGATCGACATGGCGCAGCGCAACAGCCTGAAGATCAAGAGCGCGCAGCAGAACCTGGAGCTGGC
GCGCCAGACCGTGATCGAGAAAAAGGGCAACCACCTGCCCACCGTCACCCTGAACGCCGGCTACGCCGACAATATCAGCA
ACCAGAGCGGCAGCTACCCGCACACGCGCGGCAGCAATGTCGGCGTCACCGTCAGCCTGCCGCTGTTCGCCGGCGGCGGC
ATCAACTCCCAGGTGCGCGAGGCGACGGCGCAGGAAGAAGCCGCGCGCGACCAGCTCGAATCCAGCCGCCGTCAGGTGAA
GGAAGACGTGCGCAAGGCCTTTCTCGGCGTGACCAACGGCGCCGCCCTGGTGCGCGCGCAGCAACAACTGCTGGTCTCGG
CCAAGAGCAAGGTGGAATCCACCCGCCTGGGCAAGGAAGTGGGCATCCGCACCAGCATCGACCTGCTGCAGGCCGAACAG
GCCTACTACACCGCGCTGACCACGCTGGCCAATGCCAAGTACAGCTATCTGACCGCGCGCCTGGCGCTGGCCCAGGCCGC
CGGCCAGTTGCAGCCGGATGCGCTGGCCGAGGTCAATCAGCTGATCATGCGCTGA

Upstream 100 bases:

>100_bases
TGCTGACCCTGCTGTTCCTGCCGGCGCTGTACGCCCAATGGTTCCGCGTCGGACGCAATGAACAGCGGCTCTCCGCCCAA
CCGCAAGAACAAGAGCACAA

Downstream 100 bases:

>100_bases
GCCCGGGCCGCCCCGACAAAACGCCTGTGCCGCATCCGCCACAGGCGTTTAATTTTTTAATGCATCTGTGGCTTTTTGCT
AAACACCCTCATAGAATGAT

Product: periplasmic type I secretion system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKNHRLPLIAALLMFGAALPAQAFDLVGAWQAARDYNADFAAARAQREAGQEKAVQGRSQLLPQVSVTGNYAYNNPLQPS
QGIGASGNLVANKPYETHGYNVGLQQPLFDAGKYTGYQKGKIGTELADTTFDAAEQQLILDIAQAYFDVLRARDTLAATR
ASKKTYQNLLEQARTAFEVGTATITDTHEAQAGYDGAVAQEISDANNLELAENNLKRLTGLEPSGIQTVRDQLPLLPPKP
AGLDAWIDMAQRNSLKIKSAQQNLELARQTVIEKKGNHLPTVTLNAGYADNISNQSGSYPHTRGSNVGVTVSLPLFAGGG
INSQVREATAQEEAARDQLESSRRQVKEDVRKAFLGVTNGAALVRAQQQLLVSAKSKVESTRLGKEVGIRTSIDLLQAEQ
AYYTALTTLANAKYSYLTARLALAQAAGQLQPDALAEVNQLIMR

Sequences:

>Translated_444_residues
MKNHRLPLIAALLMFGAALPAQAFDLVGAWQAARDYNADFAAARAQREAGQEKAVQGRSQLLPQVSVTGNYAYNNPLQPS
QGIGASGNLVANKPYETHGYNVGLQQPLFDAGKYTGYQKGKIGTELADTTFDAAEQQLILDIAQAYFDVLRARDTLAATR
ASKKTYQNLLEQARTAFEVGTATITDTHEAQAGYDGAVAQEISDANNLELAENNLKRLTGLEPSGIQTVRDQLPLLPPKP
AGLDAWIDMAQRNSLKIKSAQQNLELARQTVIEKKGNHLPTVTLNAGYADNISNQSGSYPHTRGSNVGVTVSLPLFAGGG
INSQVREATAQEEAARDQLESSRRQVKEDVRKAFLGVTNGAALVRAQQQLLVSAKSKVESTRLGKEVGIRTSIDLLQAEQ
AYYTALTTLANAKYSYLTARLALAQAAGQLQPDALAEVNQLIMR
>Mature_444_residues
MKNHRLPLIAALLMFGAALPAQAFDLVGAWQAARDYNADFAAARAQREAGQEKAVQGRSQLLPQVSVTGNYAYNNPLQPS
QGIGASGNLVANKPYETHGYNVGLQQPLFDAGKYTGYQKGKIGTELADTTFDAAEQQLILDIAQAYFDVLRARDTLAATR
ASKKTYQNLLEQARTAFEVGTATITDTHEAQAGYDGAVAQEISDANNLELAENNLKRLTGLEPSGIQTVRDQLPLLPPKP
AGLDAWIDMAQRNSLKIKSAQQNLELARQTVIEKKGNHLPTVTLNAGYADNISNQSGSYPHTRGSNVGVTVSLPLFAGGG
INSQVREATAQEEAARDQLESSRRQVKEDVRKAFLGVTNGAALVRAQQQLLVSAKSKVESTRLGKEVGIRTSIDLLQAEQ
AYYTALTTLANAKYSYLTARLALAQAAGQLQPDALAEVNQLIMR

Specific function: Required for proper expression of outer membrane protein genes such as ompF, nmpC, protein 2, hemolysin, colicin V, or colicin E1. May be specialized for signal sequence independent, extracellular secretion in Gram-negative bacteria [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=457, Percent_Identity=31.7286652078775, Blast_Score=204, Evalue=8e-54,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 47863; Mature: 47863

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHRLPLIAALLMFGAALPAQAFDLVGAWQAARDYNADFAAARAQREAGQEKAVQGRSQ
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
LLPQVSVTGNYAYNNPLQPSQGIGASGNLVANKPYETHGYNVGLQQPLFDAGKYTGYQKG
HCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCC
KIGTELADTTFDAAEQQLILDIAQAYFDVLRARDTLAATRASKKTYQNLLEQARTAFEVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TATITDTHEAQAGYDGAVAQEISDANNLELAENNLKRLTGLEPSGIQTVRDQLPLLPPKP
CEEECCCHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
AGLDAWIDMAQRNSLKIKSAQQNLELARQTVIEKKGNHLPTVTLNAGYADNISNQSGSYP
CCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
HTRGSNVGVTVSLPLFAGGGINSQVREATAQEEAARDQLESSRRQVKEDVRKAFLGVTNG
CCCCCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AALVRAQQQLLVSAKSKVESTRLGKEVGIRTSIDLLQAEQAYYTALTTLANAKYSYLTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LALAQAAGQLQPDALAEVNQLIMR
HHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKNHRLPLIAALLMFGAALPAQAFDLVGAWQAARDYNADFAAARAQREAGQEKAVQGRSQ
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
LLPQVSVTGNYAYNNPLQPSQGIGASGNLVANKPYETHGYNVGLQQPLFDAGKYTGYQKG
HCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCC
KIGTELADTTFDAAEQQLILDIAQAYFDVLRARDTLAATRASKKTYQNLLEQARTAFEVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TATITDTHEAQAGYDGAVAQEISDANNLELAENNLKRLTGLEPSGIQTVRDQLPLLPPKP
CEEECCCHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
AGLDAWIDMAQRNSLKIKSAQQNLELARQTVIEKKGNHLPTVTLNAGYADNISNQSGSYP
CCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
HTRGSNVGVTVSLPLFAGGGINSQVREATAQEEAARDQLESSRRQVKEDVRKAFLGVTNG
CCCCCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AALVRAQQQLLVSAKSKVESTRLGKEVGIRTSIDLLQAEQAYYTALTTLANAKYSYLTAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LALAQAAGQLQPDALAEVNQLIMR
HHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8801424 [H]