| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mtnP [H]
Identifier: 34499349
GI number: 34499349
Start: 4203047
End: 4203772
Strand: Reverse
Name: mtnP [H]
Synonym: CV_3894
Alternate gene names: 34499349
Gene position: 4203772-4203047 (Counterclockwise)
Preceding gene: 34499355
Following gene: 34499348
Centisome position: 88.48
GC content: 67.22
Gene sequence:
>726_bases ATGGCAATCATCGGCGGCAGCGGCCTGGCACAGCTGCCTGTACTGGACGTCACGCATCGCCAGGTGGTGCGCACGCCTTA CGGCGATCCTTCCTGCGCGCTGACCTTCGGCAAGCTGTCCGGCCAGAACGTGGTGTTCATCGCCCGCCACGGTTACGGCC ATTCGCTGGCGCCGCACGAGATCAATTACCGCGCCAACCTGTGGGCGCTGCACAACCAGGGCGTGAAGGGCGTGATCGCC ATCGGCACGGTGGGCGGCATCCGCCCCGACATGGCGCCGGGACGCCTGGTCGTGCCTCACGACATCATCGACTACAGCTG GGGACGCAAGCATACCTATTTCGAAGGGCCGGAGCGGCCGGTGGTGCACGCCGAGTTCACCACCCCGTATGACGCGGACC TGCGCCGGCGGCTGCGCGAGGCGATCAAGTCCACCGGCATCAGCGGGGTGCACGATGGCGTGTACGCCTGCACCCAGGGA CCGAGGCTGGAGAGCGCGGCGGAGATTCTCAAGCTGGAGCGCGACGGCGCGGACATCGTCGGCATGACCGGCATGCCGGA GGCCGCGCTGGCCCGTGAGCTGGAGCTGCCTTACGCCCACTTGTGCCTGGTCAGCAACTGGGCAGCCGGCAAGGGAAAGC AAGGCAAGGTCGAGTTCGACCCGGCGGTGGCCGCCAAGAGCGTGCAGGACCTGATGGATACTCTGCAGGCCTGCTTCGGA AGCTGA
Upstream 100 bases:
>100_bases AATCAGATGGCGGGAACAAGGGGGCGGGGAGACCGCCGTGCCCGTCCGGAACGTTCCGGACGGCGTCCGCGCAGGAAACA CGCAAGGGGAAACGAATATG
Downstream 100 bases:
>100_bases GCGCCGGGCGCCCGCCCGGGGCGGGGCGAGCCGAATGGGGCGAGATTGCCGCGGCCGGCTCAAGTGCTCCGCCCTTCGCG CCGATAAAACCGCAAAGGAC
Product: 5'-methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MAIIGGSGLAQLPVLDVTHRQVVRTPYGDPSCALTFGKLSGQNVVFIARHGYGHSLAPHEINYRANLWALHNQGVKGVIA IGTVGGIRPDMAPGRLVVPHDIIDYSWGRKHTYFEGPERPVVHAEFTTPYDADLRRRLREAIKSTGISGVHDGVYACTQG PRLESAAEILKLERDGADIVGMTGMPEAALARELELPYAHLCLVSNWAAGKGKQGKVEFDPAVAAKSVQDLMDTLQACFG S
Sequences:
>Translated_241_residues MAIIGGSGLAQLPVLDVTHRQVVRTPYGDPSCALTFGKLSGQNVVFIARHGYGHSLAPHEINYRANLWALHNQGVKGVIA IGTVGGIRPDMAPGRLVVPHDIIDYSWGRKHTYFEGPERPVVHAEFTTPYDADLRRRLREAIKSTGISGVHDGVYACTQG PRLESAAEILKLERDGADIVGMTGMPEAALARELELPYAHLCLVSNWAAGKGKQGKVEFDPAVAAKSVQDLMDTLQACFG S >Mature_240_residues AIIGGSGLAQLPVLDVTHRQVVRTPYGDPSCALTFGKLSGQNVVFIARHGYGHSLAPHEINYRANLWALHNQGVKGVIAI GTVGGIRPDMAPGRLVVPHDIIDYSWGRKHTYFEGPERPVVHAEFTTPYDADLRRRLREAIKSTGISGVHDGVYACTQGP RLESAAEILKLERDGADIVGMTGMPEAALARELELPYAHLCLVSNWAAGKGKQGKVEFDPAVAAKSVQDLMDTLQACFGS
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=223, Percent_Identity=33.1838565022422, Blast_Score=142, Evalue=4e-34, Organism=Escherichia coli, GI1788746, Length=137, Percent_Identity=28.4671532846715, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71980569, Length=214, Percent_Identity=36.9158878504673, Blast_Score=143, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6323045, Length=237, Percent_Identity=31.2236286919831, Blast_Score=120, Evalue=2e-28, Organism=Drosophila melanogaster, GI20130079, Length=210, Percent_Identity=36.1904761904762, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI221459247, Length=217, Percent_Identity=34.5622119815668, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI24656093, Length=140, Percent_Identity=32.1428571428571, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24656090, Length=140, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45552887, Length=140, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI45552885, Length=140, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 25991; Mature: 25860
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIGGSGLAQLPVLDVTHRQVVRTPYGDPSCALTFGKLSGQNVVFIARHGYGHSLAPHE CEEECCCCCCCCCEEECCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCE INYRANLWALHNQGVKGVIAIGTVGGIRPDMAPGRLVVPHDIIDYSWGRKHTYFEGPERP ECCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCC VVHAEFTTPYDADLRRRLREAIKSTGISGVHDGVYACTQGPRLESAAEILKLERDGADIV EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEE GMTGMPEAALARELELPYAHLCLVSNWAAGKGKQGKVEFDPAVAAKSVQDLMDTLQACFG ECCCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHC S C >Mature Secondary Structure AIIGGSGLAQLPVLDVTHRQVVRTPYGDPSCALTFGKLSGQNVVFIARHGYGHSLAPHE EEECCCCCCCCCEEECCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCE INYRANLWALHNQGVKGVIAIGTVGGIRPDMAPGRLVVPHDIIDYSWGRKHTYFEGPERP ECCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCC VVHAEFTTPYDADLRRRLREAIKSTGISGVHDGVYACTQGPRLESAAEILKLERDGADIV EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEE GMTGMPEAALARELELPYAHLCLVSNWAAGKGKQGKVEFDPAVAAKSVQDLMDTLQACFG ECCCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]