Click here to switch to the map view.

The map label for this gene is 34499328

Identifier: 34499328

GI number: 34499328

Start: 4176478

End: 4176831

Strand: Reverse

Name: 34499328

Synonym: CV_3873

Alternate gene names: NA

Gene position: 4176831-4176478 (Counterclockwise)

Preceding gene: 34499329

Following gene: 34499327

Centisome position: 87.91

GC content: 59.6

Gene sequence:

>354_bases
ATGTCCGGCGCCTTCTTCCCTTATCTGATGCTCGTATTCTGGCTTGTGCTGGCCGTGGCGGTCGTTTATCTGTACAGCCG
CCTGCGGCGGCTGGAGAGCAAGCGCGACAGCGTCACCTCGCTGTATCTCGACCAGCTGCAGCAGCAGATCAGCGCCTTGC
AGCGGGATGTGTCGCGTTTGCAATCGAGATTGGAAAACCGCAATCAGGGCGAGCACGGGCTGAGTCCCTACAACCAGGCG
ATAGAAATGATCCGCCAGGGGCTGACCGCTTCCGAGGTGGCGTCGCGTTGCGGCATTTCCCGCAGCGAGGCGGAGTTGAT
CGTCTCTCTTTACCGTAACAGTCCGACTTCATGA

Upstream 100 bases:

>100_bases
TGAATCCAGGAGGGATGCCCGCCCCGGGTTTTGGCTTGGGTTGCGCGGTATTTCGCCATACACTTAAGTCAGTGCGGATC
TCACCCGAGGGGAAATCTCC

Downstream 100 bases:

>100_bases
TTCCATCGTTGCCCACCAATCTGCCCGTCACCAGCCAGGGAACGGCGCAGACGCCCAATCAGCTCAGAACCTCGATAGAC
GGCGCGCGGCTGCTGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSGAFFPYLMLVFWLVLAVAVVYLYSRLRRLESKRDSVTSLYLDQLQQQISALQRDVSRLQSRLENRNQGEHGLSPYNQA
IEMIRQGLTASEVASRCGISRSEAELIVSLYRNSPTS

Sequences:

>Translated_117_residues
MSGAFFPYLMLVFWLVLAVAVVYLYSRLRRLESKRDSVTSLYLDQLQQQISALQRDVSRLQSRLENRNQGEHGLSPYNQA
IEMIRQGLTASEVASRCGISRSEAELIVSLYRNSPTS
>Mature_116_residues
SGAFFPYLMLVFWLVLAVAVVYLYSRLRRLESKRDSVTSLYLDQLQQQISALQRDVSRLQSRLENRNQGEHGLSPYNQAI
EMIRQGLTASEVASRCGISRSEAELIVSLYRNSPTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13343; Mature: 13212

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAFFPYLMLVFWLVLAVAVVYLYSRLRRLESKRDSVTSLYLDQLQQQISALQRDVSRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRLENRNQGEHGLSPYNQAIEMIRQGLTASEVASRCGISRSEAELIVSLYRNSPTS
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGAFFPYLMLVFWLVLAVAVVYLYSRLRRLESKRDSVTSLYLDQLQQQISALQRDVSRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRLENRNQGEHGLSPYNQAIEMIRQGLTASEVASRCGISRSEAELIVSLYRNSPTS
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA