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The map label for this gene is ylqH [H]

Identifier: 34499326

GI number: 34499326

Start: 4175122

End: 4175460

Strand: Reverse

Name: ylqH [H]

Synonym: CV_3871

Alternate gene names: 34499326

Gene position: 4175460-4175122 (Counterclockwise)

Preceding gene: 34499327

Following gene: 34499325

Centisome position: 87.88

GC content: 65.19

Gene sequence:

>339_bases
ATGAATGAAGCGCAGAATGACGAGAAACGCCGCTCCGCGGTGGCGCTGTCCTACAAGGAAGGGCAGCGTTCTCCCCGGGT
GGTGGCCAAGGGCTATGGCCAGATGGCCCAGCGCATCATCGATTGCGCGCAGGATGCCGGCGTGTTCGTCCACGATTCCC
CGGAACTGGTGTCGTTGCTGATGCAGGTGGATCTGGACAAGCATATTCCGCCGGAGCTGTACCGCGCCGTCGCCGAGATC
CTGGCCTTCATCTATTACCTCGAGCGCCAGGCGGGCGCCCAGGACACCGCGTTCGAAGACTGGACGGCCGGCCGCCGGGA
GGCCGCCGGCAACCCCTGA

Upstream 100 bases:

>100_bases
GAGGGGGAAACCGGACAGATGATACAGCGCCACGCGTCCCGCTTGCAGAGCGGCATGGCCGCCGCCGGCCTGAATCTGTC
CAGCCTGGTGGTGAAGCAGC

Downstream 100 bases:

>100_bases
GCGCCTCTGGCGCGCTCGACCGCAATCCCCTATCCTCACCCGATCGCTGTTTTTCTATCGGAGAGCGGAATGCGCATCGG
CTATATCGGTCTGGGCATCA

Product: flagellar biosynthesis-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNEAQNDEKRRSAVALSYKEGQRSPRVVAKGYGQMAQRIIDCAQDAGVFVHDSPELVSLLMQVDLDKHIPPELYRAVAEI
LAFIYYLERQAGAQDTAFEDWTAGRREAAGNP

Sequences:

>Translated_112_residues
MNEAQNDEKRRSAVALSYKEGQRSPRVVAKGYGQMAQRIIDCAQDAGVFVHDSPELVSLLMQVDLDKHIPPELYRAVAEI
LAFIYYLERQAGAQDTAFEDWTAGRREAAGNP
>Mature_112_residues
MNEAQNDEKRRSAVALSYKEGQRSPRVVAKGYGQMAQRIIDCAQDAGVFVHDSPELVSLLMQVDLDKHIPPELYRAVAEI
LAFIYYLERQAGAQDTAFEDWTAGRREAAGNP

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 12525; Mature: 12525

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAQNDEKRRSAVALSYKEGQRSPRVVAKGYGQMAQRIIDCAQDAGVFVHDSPELVSLL
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHH
MQVDLDKHIPPELYRAVAEILAFIYYLERQAGAQDTAFEDWTAGRREAAGNP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MNEAQNDEKRRSAVALSYKEGQRSPRVVAKGYGQMAQRIIDCAQDAGVFVHDSPELVSLL
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHH
MQVDLDKHIPPELYRAVAEILAFIYYLERQAGAQDTAFEDWTAGRREAAGNP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]