Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34499316

Identifier: 34499316

GI number: 34499316

Start: 4164498

End: 4166657

Strand: Direct

Name: 34499316

Synonym: CV_3861

Alternate gene names: NA

Gene position: 4164498-4166657 (Clockwise)

Preceding gene: 34499315

Following gene: 34499317

Centisome position: 87.65

GC content: 61.57

Gene sequence:

>2160_bases
ATGGCGTTTGAATCCTATTCGGTAGCGGTAAAAATCAGCCTTCTGAACGAGATCAGTTCAGGCTTGCGGCTGCTGTCGTC
CGATCTGGCACGCTCGCAAAAGGGCGTTGACCAGCTGCAGGGGAAGCTCGACAAACTGCGTGACTTCGCCAAGTCGGGCG
CGCTGGCAATTGGCGCGGGCGCCGGCATCACGCTGATGTTCAAGCAGCCGCTGGAGGATGCACGCAAGCTGCAGACGGAG
ATCGCGCGCTTCTCCACATTGGGCTTTGGCGATAACGTCAACCGGCAGGCGCAGCAATTCGCACTGGGCATGAAGACCTT
CGGCACCAGCCTGACCGACAACATGACGCTGTTGTCTGACGCCATGGCGGTCTTCAAAGACTTGCACCATGCCGAGTTTG
CCGCGCCGATCATGGCCAGGATGAAGTTTGCCAACGAAACGTTGTATGGCAAGGCCGGCGGCGAAGCCAATGAACGCAAG
TTCATGGATCTGCTGAAGGTGATTGAGCTGCGCGGCGGCACGCTGAGCGAAAAGGTTTTTGCGGAACAGGCCGACTTTGC
GCAGAAAGTCATTACCGGCAGCCGCAACCGGGTGGACGCTTCCCAGATGCTGCAGGCGCTGAAAACCGGCGGCCTGGCGC
TCACCCGTCGCAGCAATGAGGCCTTCTACCTGGGCGCCGAGCCACTGATCCAGGAGTTTGGCGGATCGCGCTATGGCACC
GGCACCATGTCGCTGTATCAAAACCTGGTGCAGATGCGAGGCACCATCACGTCACAGCAAGAGATGTTCCGCCTGGGCCT
GCTCAATCCCGCCATGGTCCAGTTCAATAAGCTGGGCAAGCTCAAGAAGGCCAAGGCCGGCGCGTTCATCGGCTCCAACA
TTCTGGAGGAACGGGGCGAACTCGCTTTCCTCAAAGAAGTCTTGCTACCGGCCTTCAAGCGGCACGGCATCACAGGCGAT
GAGGCCATCATCCGCGAGCTGGGCATGATCCTGAGCAACCGCACCGGTTCCGCGCTGCTGGGCCGGATCTACCAGCAGAT
GCCGACACTGGAACGTCAGATTCAGGCCAACAAGTCCGCCATGGGAATTGGCCAGAGCGAGAAGGCCGCGCGCGGCACGG
TGGACGGCCAGATGCTGGAACTGCACAAGCAGTGGAACACCTTGATGACCCAACTGGGCGTTTCCATCCTGCCATCCGCC
ATCAGCGTGCTGAAGGAGCTGAACAGCTTCCTCAGCGTGACCAACGAGCTGATGAAGAAGGACGGTGACGGCATCAAGGC
ACTGACGAAAGACCTGTTCATCCTTGGGCCGGCGCTGATGATCGGCGGCACGATCCAACTGACCAGCCGCGCCATGGGTG
GCTTGGGCCTCATCATGAAGCTGTCCAAGATGCAGTCAGAAGCCGCCGCCGGCAGCATGGGTGGTCTGACCCGAGCAACC
AAGCTGGCCGAGGTAGAAGCCACCACCACCGCCGGCCGTGTGCGCCGGCTATCCCAAGAGGTGAACGTCCTGGGTAACGC
GGCAGCAGCATCCAAGCTGAAGGCCGAAGGCGCGGCGCTGGGTGTGGGCAAACTGTCGGGCACCGTCGGCGAGCTCGACA
AGGGCGGCCGCCTGGCCAGGATTGCCGGAGGCCTGTCCCGATTCGCAATGGTGCTGGGGGAAGTCGGTCTAGCGCTGCTG
ATCCTGCCGGACATTTTCCGTGCCGCGGCAGATGCCGGCACCATCGCGGGCCGCTGGGTGGCCGGCTGGGGCCAGGACAA
AGACAAGAACCAGAACACTCACTTCAAGCCTGGCCAAAGCCTGGGCGTGATGGATAACTACCGCCCCGGCCCAACCGTCG
AGCGCGCGAACCAGATGTTCCCGAAGAAGAACGACTTCTTGGCTATCCCGGATGATGGGGCCTACGGCCACAGCAAGGAT
CGGTACCAGTTCACCACGCCGGTGTCCGTGCAAAGCCTGTTGGCCCTCTCCCCCATTCCACCAGCAGTACAGCCGGTCAT
CAACGTCAAGGTACAGGTCGGCGGCAAGGATGTGGCTGCCGTCGTCACCCGCGAGATGGTCCGCGAGGCCAGCAAACCCC
AGACCGGCATGTCTGGTTTCGACGGCTCAATGATGCCGCTGCGTCCTGACATGCCGTCCTCAATTCTCCCCCGGGGCTAA

Upstream 100 bases:

>100_bases
CGGGCCGCTGCGCCCAGTTCGTATCGGTGGCCGTCTGGGCTGGCCGGTGGAAGAAGTGGCGGCTCTGGCTGGCCAGGTCA
TGAAGGACGGAGACTAAGCC

Downstream 100 bases:

>100_bases
GCCCCAGCCATTCCGGCATCACCACGCGTAACCAGAAAGGAAGCTCCATGAACCAGCGAGTCACCGTACACCAGGCCGCC
GAAATCAATACCGAAGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 719; Mature: 718

Protein sequence:

>719_residues
MAFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAGAGITLMFKQPLEDARKLQTE
IARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSDAMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERK
FMDLLKVIELRGGTLSEKVFAEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT
GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGELAFLKEVLLPAFKRHGITGD
EAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSAMGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSA
ISVLKELNSFLSVTNELMKKDGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT
KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLARIAGGLSRFAMVLGEVGLALL
ILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQSLGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKD
RYQFTTPVSVQSLLALSPIPPAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG

Sequences:

>Translated_719_residues
MAFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAGAGITLMFKQPLEDARKLQTE
IARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSDAMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERK
FMDLLKVIELRGGTLSEKVFAEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT
GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGELAFLKEVLLPAFKRHGITGD
EAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSAMGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSA
ISVLKELNSFLSVTNELMKKDGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT
KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLARIAGGLSRFAMVLGEVGLALL
ILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQSLGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKD
RYQFTTPVSVQSLLALSPIPPAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG
>Mature_718_residues
AFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAGAGITLMFKQPLEDARKLQTEI
ARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSDAMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERKF
MDLLKVIELRGGTLSEKVFAEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGTG
TMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGELAFLKEVLLPAFKRHGITGDE
AIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSAMGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSAI
SVLKELNSFLSVTNELMKKDGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRATK
LAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLARIAGGLSRFAMVLGEVGLALLI
LPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQSLGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKDR
YQFTTPVSVQSLLALSPIPPAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77123; Mature: 76991

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAG
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECC
AGITLMFKQPLEDARKLQTEIARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSD
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
AMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERKFMDLLKVIELRGGTLSEKVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
AEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHCCCCCCCC
GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGE
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
LAFLKEVLLPAFKRHGITGDEAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
MGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSAISVLKELNSFLSVTNELMKK
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT
CCCCHHHHHHHHHHHCCHHHHCCHHEEHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHH
KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHCCCHHCCCCCCCHHH
IAGGLSRFAMVLGEVGLALLILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
LGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKDRYQFTTPVSVQSLLALSPIP
CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECCHHHHHHHHCCCCC
PAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG
CCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAG
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECC
AGITLMFKQPLEDARKLQTEIARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSD
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
AMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERKFMDLLKVIELRGGTLSEKVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
AEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHCCCCCCCC
GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGE
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
LAFLKEVLLPAFKRHGITGDEAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
MGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSAISVLKELNSFLSVTNELMKK
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT
CCCCHHHHHHHHHHHCCHHHHCCHHEEHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHH
KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHCCCHHCCCCCCCHHH
IAGGLSRFAMVLGEVGLALLILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
LGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKDRYQFTTPVSVQSLLALSPIP
CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECCHHHHHHHHCCCCC
PAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG
CCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA