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The map label for this gene is 34499312

Identifier: 34499312

GI number: 34499312

Start: 4161249

End: 4162979

Strand: Direct

Name: 34499312

Synonym: CV_3857

Alternate gene names: NA

Gene position: 4161249-4162979 (Clockwise)

Preceding gene: 34499311

Following gene: 34499313

Centisome position: 87.59

GC content: 69.67

Gene sequence:

>1731_bases
GTGGAGGGCATTCCCGGCCAGCGCGATGGCGTGTATTGGCTGCCGCCGGCGGAGGATGGCAAAGACCCGGCCACGCCGTG
GTGGCTGTGCTCGCCGCTGCACGTCCTGGCCGAGACCCGCGACGCCAGCCAATCGAATTGGGGCCGGCTGCTGGAGTGGC
GCGACAACGACGGCCACCCGCACCGCTGGGCCTGCCCGGTGGAGATGCTGGCCGCCAGCGACACCGCTGAGTTCCGCCGC
GAGCTGGTGCGCGGCGGGCTGACCATGTCGACCAGCCAGAAGGCCCGGCAAAAGCTGGTGGACTACGTGTTGAGCCACCG
CCAGGCCGCCGCGACGCGCCTGCGCTGCGTCTCCCGCATTGGCTGGCACGACGTGCGCTATGTGCTGCCCGGGGAGGTCC
ACGGCGAGCAGGACGGCGAAGGCGTGATCTACCAGGGTGCCGACAGCGGCGACTTCGACCGCGCCGGCACGCTGCAGGAG
TGGCAAACCCACATCGCCGCCGCCGCGGCCGGCAACAGCCGCATCGTGTTCGCCATCTCGGTGGCCTTCGCTGGCGTGCT
GGCAGACATGGCCGGCGAGTCGGGCGGCGGCTTCCACTTCGTCGGCACCACCAGCAAGGGCAAGACATCCACCTTGCTGG
ATCCGGCCGCCAGCGTCTGGGGCAATCCCGACCAGTTCGCCAAGAAGTGGCGTACCACCCAGAACGGGCTCGAGGGCCTA
TGCCTGGGCCGCAACGACAATCTGCTGATCCTGGACGAGCTGGCCCAGATCGCCCCGGCCGACGCCGGCGGCGCCGCCTA
CCTGATCGCCAACGGCCAGGCCAAGGCGCGCATGACCAAGGAGGGCGGCAACCGGCCGGCGCACACCTGGCGCGTGATGC
TGCTGTCAGCCGGCGAGATCGACCTGGCCCAGCACATGGCCGAAGCCGGCAAGAGCGCCAAAGGCGGCCAGATCGCCCGC
TTACCCGCCATCCCCGCCGATGCCGGCGCCGGCATGGGCACCCTGGAGCAGTTACACCAGCACCCCAGCGGCCAGGCCTT
CGCCGACGCCATGAAGGCCTACTCCCGCCAGTACTACGGCACCGCGGGCCCGGCCTTCCTCGCCGCGCTGACACCTCCGG
AATGCATGGACGAGATCCGGCGCGACATCAAAGACGGCGTCACCGGCCTGATCGAGTATCTGGGCGTTCCGGCTGGCGCC
GCGCAGGAGGTGGGCCGCGTGGCCGCGCGCTTTGCGCTGGTGGCTTTCGCCGGCGAACTGGCCACGCGCTACGGCGTCAC
CGGCTGGAAACCCGGCGAGGCGGTACAGGCGGCCCGGCGTTGCTTCCGCGAATGGCTGGCCGAGAACCATACCGGAATGG
CCGCCGACGACCGCGCGCTGTTCGCCCAGGTCAGCGGTTTCATGCAGACCCACAGCTCCACCCGCTTCCCACCGCACGAC
GCAGCTCCAGAAGTGCTGGCCCGCTACCTGAACCGCGCTGGCTTCACCTTCATCGACGAGCAAGGCACGCAGCAATTCTG
GGTGTTGTCCGAGCCCTTCAAGAAGGAGCTGTGCCGCGGCTACACCCCGCTGATCGCCGCCCGCTCGCTGCTGCGCGCCG
GCTGGCTGCTCGCCGGCGACACCGAAGGCAACACGCGGCGCCACACCCGCAAGAAGCGGATCAAGGCGCTGGATTCCGCA
ACCGTGAACGTCTACGTGCTGACCAGCACAGTACTGGAGGGCGAAGAATGA

Upstream 100 bases:

>100_bases
TTCTAGCCGTTCCCAGTTTTCCGTTCCCACTTCCGAGTGTTCCCACTTTCTCCCCGAAAATACCCCGTCGGCGCCGGCTG
ACGGCTCCCCTTTCTTCGTA

Downstream 100 bases:

>100_bases
ACATGCCGCAATGGCTCAATGCCACCATCCACCAGTCAGGGAAAAGCAGCCCAGAAGAGGCCAAAAGTGGGAACACGGGA
ACGTGGGAACAAAAAACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; Inner Membrane; Primase C 2 Family; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MEGIPGQRDGVYWLPPAEDGKDPATPWWLCSPLHVLAETRDASQSNWGRLLEWRDNDGHPHRWACPVEMLAASDTAEFRR
ELVRGGLTMSTSQKARQKLVDYVLSHRQAAATRLRCVSRIGWHDVRYVLPGEVHGEQDGEGVIYQGADSGDFDRAGTLQE
WQTHIAAAAAGNSRIVFAISVAFAGVLADMAGESGGGFHFVGTTSKGKTSTLLDPAASVWGNPDQFAKKWRTTQNGLEGL
CLGRNDNLLILDELAQIAPADAGGAAYLIANGQAKARMTKEGGNRPAHTWRVMLLSAGEIDLAQHMAEAGKSAKGGQIAR
LPAIPADAGAGMGTLEQLHQHPSGQAFADAMKAYSRQYYGTAGPAFLAALTPPECMDEIRRDIKDGVTGLIEYLGVPAGA
AQEVGRVAARFALVAFAGELATRYGVTGWKPGEAVQAARRCFREWLAENHTGMAADDRALFAQVSGFMQTHSSTRFPPHD
AAPEVLARYLNRAGFTFIDEQGTQQFWVLSEPFKKELCRGYTPLIAARSLLRAGWLLAGDTEGNTRRHTRKKRIKALDSA
TVNVYVLTSTVLEGEE

Sequences:

>Translated_576_residues
MEGIPGQRDGVYWLPPAEDGKDPATPWWLCSPLHVLAETRDASQSNWGRLLEWRDNDGHPHRWACPVEMLAASDTAEFRR
ELVRGGLTMSTSQKARQKLVDYVLSHRQAAATRLRCVSRIGWHDVRYVLPGEVHGEQDGEGVIYQGADSGDFDRAGTLQE
WQTHIAAAAAGNSRIVFAISVAFAGVLADMAGESGGGFHFVGTTSKGKTSTLLDPAASVWGNPDQFAKKWRTTQNGLEGL
CLGRNDNLLILDELAQIAPADAGGAAYLIANGQAKARMTKEGGNRPAHTWRVMLLSAGEIDLAQHMAEAGKSAKGGQIAR
LPAIPADAGAGMGTLEQLHQHPSGQAFADAMKAYSRQYYGTAGPAFLAALTPPECMDEIRRDIKDGVTGLIEYLGVPAGA
AQEVGRVAARFALVAFAGELATRYGVTGWKPGEAVQAARRCFREWLAENHTGMAADDRALFAQVSGFMQTHSSTRFPPHD
AAPEVLARYLNRAGFTFIDEQGTQQFWVLSEPFKKELCRGYTPLIAARSLLRAGWLLAGDTEGNTRRHTRKKRIKALDSA
TVNVYVLTSTVLEGEE
>Mature_576_residues
MEGIPGQRDGVYWLPPAEDGKDPATPWWLCSPLHVLAETRDASQSNWGRLLEWRDNDGHPHRWACPVEMLAASDTAEFRR
ELVRGGLTMSTSQKARQKLVDYVLSHRQAAATRLRCVSRIGWHDVRYVLPGEVHGEQDGEGVIYQGADSGDFDRAGTLQE
WQTHIAAAAAGNSRIVFAISVAFAGVLADMAGESGGGFHFVGTTSKGKTSTLLDPAASVWGNPDQFAKKWRTTQNGLEGL
CLGRNDNLLILDELAQIAPADAGGAAYLIANGQAKARMTKEGGNRPAHTWRVMLLSAGEIDLAQHMAEAGKSAKGGQIAR
LPAIPADAGAGMGTLEQLHQHPSGQAFADAMKAYSRQYYGTAGPAFLAALTPPECMDEIRRDIKDGVTGLIEYLGVPAGA
AQEVGRVAARFALVAFAGELATRYGVTGWKPGEAVQAARRCFREWLAENHTGMAADDRALFAQVSGFMQTHSSTRFPPHD
AAPEVLARYLNRAGFTFIDEQGTQQFWVLSEPFKKELCRGYTPLIAARSLLRAGWLLAGDTEGNTRRHTRKKRIKALDSA
TVNVYVLTSTVLEGEE

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62404; Mature: 62404

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIPGQRDGVYWLPPAEDGKDPATPWWLCSPLHVLAETRDASQSNWGRLLEWRDNDGHP
CCCCCCCCCCEEECCCCCCCCCCCCCCCHHCHHHHHHHHCCCCCCCCCCEEEEECCCCCC
HRWACPVEMLAASDTAEFRRELVRGGLTMSTSQKARQKLVDYVLSHRQAAATRLRCVSRI
CEEECHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWHDVRYVLPGEVHGEQDGEGVIYQGADSGDFDRAGTLQEWQTHIAAAAAGNSRIVFAIS
CCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHH
VAFAGVLADMAGESGGGFHFVGTTSKGKTSTLLDPAASVWGNPDQFAKKWRTTQNGLEGL
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHCCCCEE
CLGRNDNLLILDELAQIAPADAGGAAYLIANGQAKARMTKEGGNRPAHTWRVMLLSAGEI
EECCCCCEEEHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCEEEEEEEECCCH
DLAQHMAEAGKSAKGGQIARLPAIPADAGAGMGTLEQLHQHPSGQAFADAMKAYSRQYYG
HHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCC
TAGPAFLAALTPPECMDEIRRDIKDGVTGLIEYLGVPAGAAQEVGRVAARFALVAFAGEL
CCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ATRYGVTGWKPGEAVQAARRCFREWLAENHTGMAADDRALFAQVSGFMQTHSSTRFPPHD
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
AAPEVLARYLNRAGFTFIDEQGTQQFWVLSEPFKKELCRGYTPLIAARSLLRAGWLLAGD
CCHHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHCCEEEEC
TEGNTRRHTRKKRIKALDSATVNVYVLTSTVLEGEE
CCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCC
>Mature Secondary Structure
MEGIPGQRDGVYWLPPAEDGKDPATPWWLCSPLHVLAETRDASQSNWGRLLEWRDNDGHP
CCCCCCCCCCEEECCCCCCCCCCCCCCCHHCHHHHHHHHCCCCCCCCCCEEEEECCCCCC
HRWACPVEMLAASDTAEFRRELVRGGLTMSTSQKARQKLVDYVLSHRQAAATRLRCVSRI
CEEECHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWHDVRYVLPGEVHGEQDGEGVIYQGADSGDFDRAGTLQEWQTHIAAAAAGNSRIVFAIS
CCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHH
VAFAGVLADMAGESGGGFHFVGTTSKGKTSTLLDPAASVWGNPDQFAKKWRTTQNGLEGL
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHCCCCEE
CLGRNDNLLILDELAQIAPADAGGAAYLIANGQAKARMTKEGGNRPAHTWRVMLLSAGEI
EECCCCCEEEHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCEEEEEEEECCCH
DLAQHMAEAGKSAKGGQIARLPAIPADAGAGMGTLEQLHQHPSGQAFADAMKAYSRQYYG
HHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCC
TAGPAFLAALTPPECMDEIRRDIKDGVTGLIEYLGVPAGAAQEVGRVAARFALVAFAGEL
CCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ATRYGVTGWKPGEAVQAARRCFREWLAENHTGMAADDRALFAQVSGFMQTHSSTRFPPHD
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
AAPEVLARYLNRAGFTFIDEQGTQQFWVLSEPFKKELCRGYTPLIAARSLLRAGWLLAGD
CCHHHHHHHHHHCCCEEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHCCEEEEC
TEGNTRRHTRKKRIKALDSATVNVYVLTSTVLEGEE
CCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA