| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499311
Identifier: 34499311
GI number: 34499311
Start: 4159673
End: 4160014
Strand: Direct
Name: 34499311
Synonym: CV_3856
Alternate gene names: NA
Gene position: 4159673-4160014 (Clockwise)
Preceding gene: 34499310
Following gene: 34499312
Centisome position: 87.55
GC content: 60.23
Gene sequence:
>342_bases ATGAGTCCCGTTCACTTCAACCCCGCTGCCGGCTCTCGCCTGCTCCCTGCCGTGGAGAACCTTCGCCATGAGGCCGATGA GCTGATCCACGAAAGCATCGATACCCAGGCTTACCTCTTGGGTGCGCTCGAAGGAGAGTTGATCTTCGCCTTGTCAGTAG ATAAAGACAGCCCGAGCAGCACTCTGACTCGCTGCAAGTCGCAGCTGCTGCTACGCCTTGGTCTGGAGGGCCGCAGCCTG ACGCTGGAGCAACAGCGCCTGCGCGGCTGGATCGTGGGTATGCTGGAAAGCATCGCCTCCACACTGGATCCCGACGACTG GGATAACCCGACCTCCACTTAA
Upstream 100 bases:
>100_bases TCTGCGCATTACAAAACGCAGTGCAGATGGCCGGCGATGGATATCGAGTTGCTCAAGCAAGGGAAGCCAAACAGCAGTCG AAGCACAAGGAGGCCAACTC
Downstream 100 bases:
>100_bases GCACACCACAACCTAGACACGGGGAGGCCCTGACCCACGAACGGACACGTTTCCGGGCGCGGGCCTCCTTACGCCCAAAG GGTACGCAATGAGCAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSPVHFNPAAGSRLLPAVENLRHEADELIHESIDTQAYLLGALEGELIFALSVDKDSPSSTLTRCKSQLLLRLGLEGRSL TLEQQRLRGWIVGMLESIASTLDPDDWDNPTST
Sequences:
>Translated_113_residues MSPVHFNPAAGSRLLPAVENLRHEADELIHESIDTQAYLLGALEGELIFALSVDKDSPSSTLTRCKSQLLLRLGLEGRSL TLEQQRLRGWIVGMLESIASTLDPDDWDNPTST >Mature_112_residues SPVHFNPAAGSRLLPAVENLRHEADELIHESIDTQAYLLGALEGELIFALSVDKDSPSSTLTRCKSQLLLRLGLEGRSLT LEQQRLRGWIVGMLESIASTLDPDDWDNPTST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12441; Mature: 12310
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPVHFNPAAGSRLLPAVENLRHEADELIHESIDTQAYLLGALEGELIFALSVDKDSPSS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCCCHH TLTRCKSQLLLRLGLEGRSLTLEQQRLRGWIVGMLESIASTLDPDDWDNPTST HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SPVHFNPAAGSRLLPAVENLRHEADELIHESIDTQAYLLGALEGELIFALSVDKDSPSS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCCCHH TLTRCKSQLLLRLGLEGRSLTLEQQRLRGWIVGMLESIASTLDPDDWDNPTST HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA