| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yacG [C]
Identifier: 34499278
GI number: 34499278
Start: 4121920
End: 4122111
Strand: Reverse
Name: yacG [C]
Synonym: CV_3823
Alternate gene names: 34499278
Gene position: 4122111-4121920 (Counterclockwise)
Preceding gene: 34499279
Following gene: 34499275
Centisome position: 86.76
GC content: 66.67
Gene sequence:
>192_bases ATGTCCGAGTCCGTACGCATCGTCGCCTGCCCCACCTGCAAAGCCGAAGTGCGCTGGGAGCCGCAGAGCCGTTATCGCCC GTTCTGCAGCGAGCGCTGCCGCCTGATCGACCTGGGGCAGTGGGCCAGCGAGAGTTATCGGGTGCCGGCAGAGGAGGATC ATCCTCCCGGGGAAACGCCGCCGACGCATTGA
Upstream 100 bases:
>100_bases TCAACATCCGCTTCGTCAGCGCGGTGACCGGCGAGGCCCGGCCGCGGCAGACCGAACAGGATGTCGAATTCCAACTGACC AACTGCAAGTTTTGAGCATC
Downstream 100 bases:
>100_bases GCGCTGGCTGACAGACAAAAAAACCGCCAGGCCAAATGGCCGGCGGTTTTGTTTTGGCGGCTGGACGCCCGTTCAGGCGC GCGCGGCCAGCGCCGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MSESVRIVACPTCKAEVRWEPQSRYRPFCSERCRLIDLGQWASESYRVPAEEDHPPGETPPTH
Sequences:
>Translated_63_residues MSESVRIVACPTCKAEVRWEPQSRYRPFCSERCRLIDLGQWASESYRVPAEEDHPPGETPPTH >Mature_62_residues SESVRIVACPTCKAEVRWEPQSRYRPFCSERCRLIDLGQWASESYRVPAEEDHPPGETPPTH
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
Organism=Escherichia coli, GI1786290, Length=53, Percent_Identity=54.7169811320755, Blast_Score=62, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3823_CHRVO (Q7NRF8)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903493.1 - ProteinModelPortal: Q7NRF8 - SMR: Q7NRF8 - GeneID: 2546971 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3823 - NMPDR: fig|243365.1.peg.3823 - HOGENOM: HBG552546 - OMA: EISEPDM - PhylomeDB: Q7NRF8 - BioCyc: CVIO243365:CV_3823-MONOMER - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 7273; Mature: 7142
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESVRIVACPTCKAEVRWEPQSRYRPFCSERCRLIDLGQWASESYRVPAEEDHPPGETP CCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC PTH CCC >Mature Secondary Structure SESVRIVACPTCKAEVRWEPQSRYRPFCSERCRLIDLGQWASESYRVPAEEDHPPGETP CCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC PTH CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782