| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is queF
Identifier: 34499205
GI number: 34499205
Start: 4048204
End: 4049043
Strand: Direct
Name: queF
Synonym: CV_3750
Alternate gene names: 34499205
Gene position: 4048204-4049043 (Clockwise)
Preceding gene: 34499204
Following gene: 34499208
Centisome position: 85.21
GC content: 66.55
Gene sequence:
>840_bases ATGAACATACATGCCGCCACACCCGAACATTCGCCGCTGGGCAAAACCGTCAGCTACCAGGACCAGTACGATCCGTCCCT GCTGTTCCCGATCGCGCGCCAGACCAAGCGCGACGAGATCGGCGTGGATGAAGCCGCGCTGCCCTTCGCCGGCGTCGACA TCTGGACCGGCTTCGAGCTGTCCTGGCTCAACGCCCGCGGCAAGCCGCAGATCGGCATCGCCACCTTCCGCATTCCGGCC GGCAGCCCCAGGCTGATCGAGTCCAAGTCGTTCAAGCTCTACCTGAACAGCTACAACCAGACGCGGATGGACGGCATCGA CGCCCTCGCCGCCCAGTTGGCGCGGGACCTGTCCGCCGCCGCCGGCGCCGAGGTGGCGGTCAGCATCGCGCTGCCGCAAG CCTTCGCCGCCGAGCGGATCGCCGAGCTCGCGGGCGAATGCATCGACGAGCTGGACATCGCCGTCGACAACTACGCGCCC TGCCCGGAAATCCTGAGCGCCGACTCCACGGCCATCGTCAGCGAAACGCTGTGCAGCAATCTCTTGAAGTCCAACTGCCT GGTCACCGGCCAGCCGGACTGGGGCAGCGTGTCCATCCGCTACACCGGTCCGAAAATAGACCGCGAAGCGCTGCTGAGGT ATCTGATCGGCTTCCGCCGGCACAATGAATTCCACGAGCAATGCGTCGAGCGCATCTTCGTCGACGTGCTGCGCGCCTGC GCGCCAACGAAGCTGACCGTCTACGCCCGCTACACCCGCCGCGGCGGCCTGGACATCAACCCCTGGCGCAGCAACTGCGA CGCAGCGCCGACGGACAACGTCCGCACCGCCCGGCAGTAG
Upstream 100 bases:
>100_bases ATAAATCAATCTGGCTGGGCGTGGCGCTGCATTGCAGCGTGGCGCTGACCATGGACCTGATGGCGCTGTGGCGCAAGGGT CTGCTGTAAAGGAAATCATC
Downstream 100 bases:
>100_bases CGCCGGCGAAACGCGCAAAACAAAAGGGATGCTTCTCGGCATCCCTTTTTTTGCGGCCCAGGCCAGGCATCAGAACGGCG CCGGCGCCTCGAACTCCATT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNIHAATPEHSPLGKTVSYQDQYDPSLLFPIARQTKRDEIGVDEAALPFAGVDIWTGFELSWLNARGKPQIGIATFRIPA GSPRLIESKSFKLYLNSYNQTRMDGIDALAAQLARDLSAAAGAEVAVSIALPQAFAAERIAELAGECIDELDIAVDNYAP CPEILSADSTAIVSETLCSNLLKSNCLVTGQPDWGSVSIRYTGPKIDREALLRYLIGFRRHNEFHEQCVERIFVDVLRAC APTKLTVYARYTRRGGLDINPWRSNCDAAPTDNVRTARQ
Sequences:
>Translated_279_residues MNIHAATPEHSPLGKTVSYQDQYDPSLLFPIARQTKRDEIGVDEAALPFAGVDIWTGFELSWLNARGKPQIGIATFRIPA GSPRLIESKSFKLYLNSYNQTRMDGIDALAAQLARDLSAAAGAEVAVSIALPQAFAAERIAELAGECIDELDIAVDNYAP CPEILSADSTAIVSETLCSNLLKSNCLVTGQPDWGSVSIRYTGPKIDREALLRYLIGFRRHNEFHEQCVERIFVDVLRAC APTKLTVYARYTRRGGLDINPWRSNCDAAPTDNVRTARQ >Mature_279_residues MNIHAATPEHSPLGKTVSYQDQYDPSLLFPIARQTKRDEIGVDEAALPFAGVDIWTGFELSWLNARGKPQIGIATFRIPA GSPRLIESKSFKLYLNSYNQTRMDGIDALAAQLARDLSAAAGAEVAVSIALPQAFAAERIAELAGECIDELDIAVDNYAP CPEILSADSTAIVSETLCSNLLKSNCLVTGQPDWGSVSIRYTGPKIDREALLRYLIGFRRHNEFHEQCVERIFVDVLRAC APTKLTVYARYTRRGGLDINPWRSNCDAAPTDNVRTARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1789158, Length=269, Percent_Identity=54.275092936803, Blast_Score=303, Evalue=8e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_CHRVO (Q7NRN0)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903420.1 - ProteinModelPortal: Q7NRN0 - SMR: Q7NRN0 - GeneID: 2549178 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3750 - NMPDR: fig|243365.1.peg.3750 - HOGENOM: HBG289139 - OMA: PFRSNFE - PhylomeDB: Q7NRN0 - ProtClustDB: PRK11792 - BioCyc: CVIO243365:CV_3750-MONOMER - BRENDA: 1.7.1.13 - GO: GO:0005737 - HAMAP: MF_00817 - InterPro: IPR016428 - InterPro: IPR020602 - PIRSF: PIRSF004750 - TIGRFAMs: TIGR03138
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 30700; Mature: 30700
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIHAATPEHSPLGKTVSYQDQYDPSLLFPIARQTKRDEIGVDEAALPFAGVDIWTGFEL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCEEECCCEE SWLNARGKPQIGIATFRIPAGSPRLIESKSFKLYLNSYNQTRMDGIDALAAQLARDLSAA EEECCCCCCCEEEEEEEECCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AGAEVAVSIALPQAFAAERIAELAGECIDELDIAVDNYAPCPEILSADSTAIVSETLCSN CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH LLKSNCLVTGQPDWGSVSIRYTGPKIDREALLRYLIGFRRHNEFHEQCVERIFVDVLRAC HHHCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC APTKLTVYARYTRRGGLDINPWRSNCDAAPTDNVRTARQ CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNIHAATPEHSPLGKTVSYQDQYDPSLLFPIARQTKRDEIGVDEAALPFAGVDIWTGFEL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCEEECCCEE SWLNARGKPQIGIATFRIPAGSPRLIESKSFKLYLNSYNQTRMDGIDALAAQLARDLSAA EEECCCCCCCEEEEEEEECCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AGAEVAVSIALPQAFAAERIAELAGECIDELDIAVDNYAPCPEILSADSTAIVSETLCSN CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH LLKSNCLVTGQPDWGSVSIRYTGPKIDREALLRYLIGFRRHNEFHEQCVERIFVDVLRAC HHHCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC APTKLTVYARYTRRGGLDINPWRSNCDAAPTDNVRTARQ CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782