| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499196
Identifier: 34499196
GI number: 34499196
Start: 4040568
End: 4041245
Strand: Reverse
Name: 34499196
Synonym: CV_3741
Alternate gene names: NA
Gene position: 4041245-4040568 (Counterclockwise)
Preceding gene: 34499197
Following gene: 34499195
Centisome position: 85.06
GC content: 65.49
Gene sequence:
>678_bases ATGTCGGTTCCCCCGCAAATCAAGATGACCCTGAAGGGGTACCTGATCGCCGGCCTGCTGATCTGGCTGCCGCTGGCGAT CACCCTGTGGGTGCTGAACCTGATCATCGGTTCGCTGGACCAGACGCTGACGCTGCTGCCGGCCGAATGGCGTCCGGAGC GGCTGTTCGGCATGCATATCCCCGGCCTCGGGGTGGTATTCGCCGTATTGGTGGTGATGGGCACCGGCATGCTGGCCGCC AACGTGCTGGGCCGCCGCCTGGTGGAGTTCTGGCACGGCCTGCTGTCGCGCACGCCGGTGGTCAGCTCCATCTACAACAG CGTCAAGCAGGTCAGCGACACGCTGCTGTCCGACTCCGGCAACGCGTTCAAGAACGCGCTGCTGGTGCGCTGGCCTCACC AGAACGCCTGGACCGTGGCCTTCCAGACCGGCACGCCGGCCCAGGAGATCCTGCGCCACGCCGAGAGCGGCGAGGAGCTG GTCAGCGTTTACGTGCCGACCACGCCGAACCCCACTTCCGGCTATTTCATCGTGGTGCCGCGCAGCGACACCCGCGAGCT GAACATGAGCGTCGATGAGGCGCTCAAGTACGTCATTTCCATGGGCGTGGTGGTTCCGAACCCGCCGCCGCAGGCTCAGC GCCCGCGGCTGAATGATGAACATAATCGGCAGGGCTAG
Upstream 100 bases:
>100_bases GCTGGTACGCGACCGACTTCAAGGGCGGCTCGTCGAGCGCGTCCGGCGGCTCGGCCCCGGCCGGCGGCCACAGTTGCGGC GCCGGCTGCGGTTGCGACTG
Downstream 100 bases:
>100_bases GCCGTCACCCTGTCTAGCCCCTAAGCATGTCGTCCCCTAGCGGGAACTTCGAAGAATTCAATCAAAAAGGTTTACCCAAT GCGCACCGATTATTGCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSVPPQIKMTLKGYLIAGLLIWLPLAITLWVLNLIIGSLDQTLTLLPAEWRPERLFGMHIPGLGVVFAVLVVMGTGMLAA NVLGRRLVEFWHGLLSRTPVVSSIYNSVKQVSDTLLSDSGNAFKNALLVRWPHQNAWTVAFQTGTPAQEILRHAESGEEL VSVYVPTTPNPTSGYFIVVPRSDTRELNMSVDEALKYVISMGVVVPNPPPQAQRPRLNDEHNRQG
Sequences:
>Translated_225_residues MSVPPQIKMTLKGYLIAGLLIWLPLAITLWVLNLIIGSLDQTLTLLPAEWRPERLFGMHIPGLGVVFAVLVVMGTGMLAA NVLGRRLVEFWHGLLSRTPVVSSIYNSVKQVSDTLLSDSGNAFKNALLVRWPHQNAWTVAFQTGTPAQEILRHAESGEEL VSVYVPTTPNPTSGYFIVVPRSDTRELNMSVDEALKYVISMGVVVPNPPPQAQRPRLNDEHNRQG >Mature_224_residues SVPPQIKMTLKGYLIAGLLIWLPLAITLWVLNLIIGSLDQTLTLLPAEWRPERLFGMHIPGLGVVFAVLVVMGTGMLAAN VLGRRLVEFWHGLLSRTPVVSSIYNSVKQVSDTLLSDSGNAFKNALLVRWPHQNAWTVAFQTGTPAQEILRHAESGEELV SVYVPTTPNPTSGYFIVVPRSDTRELNMSVDEALKYVISMGVVVPNPPPQAQRPRLNDEHNRQG
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24839; Mature: 24708
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPPQIKMTLKGYLIAGLLIWLPLAITLWVLNLIIGSLDQTLTLLPAEWRPERLFGMHI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEECCC PGLGVVFAVLVVMGTGMLAANVLGRRLVEFWHGLLSRTPVVSSIYNSVKQVSDTLLSDSG CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC NAFKNALLVRWPHQNAWTVAFQTGTPAQEILRHAESGEELVSVYVPTTPNPTSGYFIVVP CHHHCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEE RSDTRELNMSVDEALKYVISMGVVVPNPPPQAQRPRLNDEHNRQG CCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVPPQIKMTLKGYLIAGLLIWLPLAITLWVLNLIIGSLDQTLTLLPAEWRPERLFGMHI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEECCC PGLGVVFAVLVVMGTGMLAANVLGRRLVEFWHGLLSRTPVVSSIYNSVKQVSDTLLSDSG CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC NAFKNALLVRWPHQNAWTVAFQTGTPAQEILRHAESGEELVSVYVPTTPNPTSGYFIVVP CHHHCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEE RSDTRELNMSVDEALKYVISMGVVVPNPPPQAQRPRLNDEHNRQG CCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA