| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is yqjV [H]
Identifier: 34499191
GI number: 34499191
Start: 4034005
End: 4035228
Strand: Direct
Name: yqjV [H]
Synonym: CV_3736
Alternate gene names: 34499191
Gene position: 4034005-4035228 (Clockwise)
Preceding gene: 34499190
Following gene: 34499198
Centisome position: 84.91
GC content: 67.73
Gene sequence:
>1224_bases ATGCCTCAAGCCGCTTTGCTACGCCGTCTTTCCCGTCCCTACCGCGGCCTGCCGCCCAGCGTCTACATCCAGGTCGTCTG CAGCTTCATCAACAACGTGGGCGGCATCTCCAAGCTGTTCCTGCCGCTGTATCTGCGCGAGAGCTACCAGCTACCCTACA ACCAGATCGGCATGCTGATGGCTTTCTACGGCGCCGGCATGCTGGCCGGTTCGCTGAAGGGCGGCAGCCTGACCGACCGC TTCGACAGCCGCGCGCTGGGCGTGCTGGCCCTGGCCGTGTCCGGCCTGTGCATGGTTTTGCTGGCGTTGCGGATTCCGGT GTGGCTGTTCATGCCGGTGCTGGTGCTGTCCGGCATGGCCGACGGCGGCTTCCGGCCGATCAACCAACGGCTGGCGCTGG AGCCCTGCGCGCCGCAGCAGCGTCCGGTGGCCCAGGGCATGATGCGGGTAGCCTTCAACCTGGGCGTGGCCATCGCCGGC GTCAGCAGCGGCTTCCTCGCCGCCTATGGCTACCAATGGGTGTACGCCGCCAATGCCGCCGGCACGCTGCTGGGTGCCTG CTGGATGGCCTGTTCCTACGCCCGCCGCGTGGAAAGCACCCGTCCGCAGAGGCGCCGGGCCGATGATGAAGACGCTTTGG CCGGCCCCTGGCGCGACGCGAGCTTTCTGCGCAGCATCCTGGCGCTGGTGCTGATCACGCTGGCCTTCGACCAGATGTAC GTCACGCTGGCGCTGTTCCTGCGCGAACACTACCAACTGGGGCCGCAATGGGTCGGCTACCTGTTCACCCTCAACGGCCT GATGGTGGTGGCGCTGCAGATTCCGATCAGCCGGCGCATCCTGCGCTGGGGGCTGGCGCGCAGCACCCAGCTGGGCGTGC TGCTGACCGGCTGCTCCTTCCTGTGGCTGAACGCCGGCCACGGCGTGCCGTGGGCGGTGCTGATGATGATGACGCTGACC TTCGGCGAGCTGTTGCTGTCGCCCAGCTACGCCCATCTGGTGATGCACCGCTCCGAGGGCAGGCTGCGCGGCAGCTACCT GGGACTCTACAACGCGGCATGGAACGGAAGAACGCTGGTCGCGCCGGCGCTGGGCACCGCGCTCTATGGCCAGTTCGGAG GGCAAATGCTATGGTGGCTGTGCGCGCTGGCCGCCTGCCTGGGCGTGGCCATCCAGCACGGCGCGCTGAAAGCCATGCTC GCCCCCGCGGCGGAAAGGGGCTAA
Upstream 100 bases:
>100_bases TTTTAAATAGAAGAATAAGCATATCGCATAACCATACAACGATCCGCCAATCTGCTTCCGCCGCGCAGCCGGAACCAGGC CGAACGGCCGTTGCCGCGCC
Downstream 100 bases:
>100_bases GGCCCGTCAACGCGGATCCAGACCCTAGATGTCATCCATCGGAGACGCCAGGCAGACCCGGTTGCGCCCGCCCTGCTTGG CGCGGTACAGCGCCACGTCG
Product: multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MPQAALLRRLSRPYRGLPPSVYIQVVCSFINNVGGISKLFLPLYLRESYQLPYNQIGMLMAFYGAGMLAGSLKGGSLTDR FDSRALGVLALAVSGLCMVLLALRIPVWLFMPVLVLSGMADGGFRPINQRLALEPCAPQQRPVAQGMMRVAFNLGVAIAG VSSGFLAAYGYQWVYAANAAGTLLGACWMACSYARRVESTRPQRRRADDEDALAGPWRDASFLRSILALVLITLAFDQMY VTLALFLREHYQLGPQWVGYLFTLNGLMVVALQIPISRRILRWGLARSTQLGVLLTGCSFLWLNAGHGVPWAVLMMMTLT FGELLLSPSYAHLVMHRSEGRLRGSYLGLYNAAWNGRTLVAPALGTALYGQFGGQMLWWLCALAACLGVAIQHGALKAML APAAERG
Sequences:
>Translated_407_residues MPQAALLRRLSRPYRGLPPSVYIQVVCSFINNVGGISKLFLPLYLRESYQLPYNQIGMLMAFYGAGMLAGSLKGGSLTDR FDSRALGVLALAVSGLCMVLLALRIPVWLFMPVLVLSGMADGGFRPINQRLALEPCAPQQRPVAQGMMRVAFNLGVAIAG VSSGFLAAYGYQWVYAANAAGTLLGACWMACSYARRVESTRPQRRRADDEDALAGPWRDASFLRSILALVLITLAFDQMY VTLALFLREHYQLGPQWVGYLFTLNGLMVVALQIPISRRILRWGLARSTQLGVLLTGCSFLWLNAGHGVPWAVLMMMTLT FGELLLSPSYAHLVMHRSEGRLRGSYLGLYNAAWNGRTLVAPALGTALYGQFGGQMLWWLCALAACLGVAIQHGALKAML APAAERG >Mature_406_residues PQAALLRRLSRPYRGLPPSVYIQVVCSFINNVGGISKLFLPLYLRESYQLPYNQIGMLMAFYGAGMLAGSLKGGSLTDRF DSRALGVLALAVSGLCMVLLALRIPVWLFMPVLVLSGMADGGFRPINQRLALEPCAPQQRPVAQGMMRVAFNLGVAIAGV SSGFLAAYGYQWVYAANAAGTLLGACWMACSYARRVESTRPQRRRADDEDALAGPWRDASFLRSILALVLITLAFDQMYV TLALFLREHYQLGPQWVGYLFTLNGLMVVALQIPISRRILRWGLARSTQLGVLLTGCSFLWLNAGHGVPWAVLMMMTLTF GELLLSPSYAHLVMHRSEGRLRGSYLGLYNAAWNGRTLVAPALGTALYGQFGGQMLWWLCALAACLGVAIQHGALKAMLA PAAERG
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44414; Mature: 44283
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQAALLRRLSRPYRGLPPSVYIQVVCSFINNVGGISKLFLPLYLRESYQLPYNQIGMLM CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AFYGAGMLAGSLKGGSLTDRFDSRALGVLALAVSGLCMVLLALRIPVWLFMPVLVLSGMA HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGGFRPINQRLALEPCAPQQRPVAQGMMRVAFNLGVAIAGVSSGFLAAYGYQWVYAANAA CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCHHEECCCCCHHHHHCCCEEEECCHH GTLLGACWMACSYARRVESTRPQRRRADDEDALAGPWRDASFLRSILALVLITLAFDQMY HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VTLALFLREHYQLGPQWVGYLFTLNGLMVVALQIPISRRILRWGLARSTQLGVLLTGCSF HHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCHHHHHCCHH LWLNAGHGVPWAVLMMMTLTFGELLLSPSYAHLVMHRSEGRLRGSYLGLYNAAWNGRTLV EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCHHHEEEEECCCCCCEEE APALGTALYGQFGGQMLWWLCALAACLGVAIQHGALKAMLAPAAERG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PQAALLRRLSRPYRGLPPSVYIQVVCSFINNVGGISKLFLPLYLRESYQLPYNQIGMLM CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AFYGAGMLAGSLKGGSLTDRFDSRALGVLALAVSGLCMVLLALRIPVWLFMPVLVLSGMA HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGGFRPINQRLALEPCAPQQRPVAQGMMRVAFNLGVAIAGVSSGFLAAYGYQWVYAANAA CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCHHEECCCCCHHHHHCCCEEEECCHH GTLLGACWMACSYARRVESTRPQRRRADDEDALAGPWRDASFLRSILALVLITLAFDQMY HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VTLALFLREHYQLGPQWVGYLFTLNGLMVVALQIPISRRILRWGLARSTQLGVLLTGCSF HHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCHHHHHCCHH LWLNAGHGVPWAVLMMMTLTFGELLLSPSYAHLVMHRSEGRLRGSYLGLYNAAWNGRTLV EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCHHHEEEEECCCCCCEEE APALGTALYGQFGGQMLWWLCALAACLGVAIQHGALKAMLAPAAERG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]