Click here to switch to the map view.

The map label for this gene is ydiA [C]

Identifier: 34499165

GI number: 34499165

Start: 4013102

End: 4013923

Strand: Direct

Name: ydiA [C]

Synonym: CV_3710

Alternate gene names: 34499165

Gene position: 4013102-4013923 (Clockwise)

Preceding gene: 34499163

Following gene: 34499169

Centisome position: 84.47

GC content: 63.63

Gene sequence:

>822_bases
ATGTCTCACCACCGCTCCGCCTTCTTCATTTCCGACCGCACCGGCATCACCGCCGAATCGCTGGGCCATACCCTGCTGAC
CCAGTTCGACGCGCTGGACTTCCAGCGCGAGACCGTGCCCTTCGTCGACACCGTAGAGAAAGCGCGCGCGCTGGCCGAGC
GCATCAGCGAGATCGCGGAGCGCGACCACCTGCGCCCGCTGGTCTTCACCAGCATCGTCAACCCGGAAGTGCGCGAGGCG
CTGCGGCTGAACAACGTGGTGCTGATCGACTTCTTCGAAAGCTTCATCGGCCACCTGGAGATCGAGCTTGGCCAGAAGGC
GACGCTGACGGTGGGCAAGGCCCACGGCATGGTCAACGAGGAGAAATACGACCACCGGATCGAGGCGGTCAATTTCTCGC
TGAACCACGACGACGGCGTCAAGCTGAAGGACCTGCACGAGGCCGACGTGATCCTGGTCGGCGTGTCCCGCTCCGGCAAG
ACGCCAACCTGCCTGTACCTGGCGCTGCAGTACGGCATACGCGCGGCCAACTACCCGCTGACGCCGGAAGACTTGGGCAG
CCCGACGCTGCCCAAGATGCTGCTGCCGTTCAAGGACAAGATGTTCGGCCTCACCATCGATCCCAACCGGCTGCACCACA
TTCGCTCGGAGCGCCGTCCGGATTCCAAGTACGCCAGCATGGACAACTGCCGCCGCGAGGTGAACGAGGCGGAGTCGATG
TTCCGCCATCACGGGGTGCCCTTCATCAGCACCACGCACAAGTCGATCGAGGAAATCGCGTCCACCATCATGCACAAGGC
GGCGCTGGGCCGGAAATTCTGA

Upstream 100 bases:

>100_bases
ATGATTACATGAAGAAAACGAACCGCGCCCCGCCATATCGCCGCCGTCCGCGCCGGTATACACTTTGCAGCAGGCAAATC
CACCATCCGCAAGGTCATCC

Downstream 100 bases:

>100_bases
TCCCGCCGAGCGGCGCCTAGCCGCCCGCCCGCTTGGCCTTGAAACCCAGCCTGGCCAGCTCGGCGACCACGGTCTCGACG
TGGTCGCCCTGGATTTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSHHRSAFFISDRTGITAESLGHTLLTQFDALDFQRETVPFVDTVEKARALAERISEIAERDHLRPLVFTSIVNPEVREA
LRLNNVVLIDFFESFIGHLEIELGQKATLTVGKAHGMVNEEKYDHRIEAVNFSLNHDDGVKLKDLHEADVILVGVSRSGK
TPTCLYLALQYGIRAANYPLTPEDLGSPTLPKMLLPFKDKMFGLTIDPNRLHHIRSERRPDSKYASMDNCRREVNEAESM
FRHHGVPFISTTHKSIEEIASTIMHKAALGRKF

Sequences:

>Translated_273_residues
MSHHRSAFFISDRTGITAESLGHTLLTQFDALDFQRETVPFVDTVEKARALAERISEIAERDHLRPLVFTSIVNPEVREA
LRLNNVVLIDFFESFIGHLEIELGQKATLTVGKAHGMVNEEKYDHRIEAVNFSLNHDDGVKLKDLHEADVILVGVSRSGK
TPTCLYLALQYGIRAANYPLTPEDLGSPTLPKMLLPFKDKMFGLTIDPNRLHHIRSERRPDSKYASMDNCRREVNEAESM
FRHHGVPFISTTHKSIEEIASTIMHKAALGRKF
>Mature_272_residues
SHHRSAFFISDRTGITAESLGHTLLTQFDALDFQRETVPFVDTVEKARALAERISEIAERDHLRPLVFTSIVNPEVREAL
RLNNVVLIDFFESFIGHLEIELGQKATLTVGKAHGMVNEEKYDHRIEAVNFSLNHDDGVKLKDLHEADVILVGVSRSGKT
PTCLYLALQYGIRAANYPLTPEDLGSPTLPKMLLPFKDKMFGLTIDPNRLHHIRSERRPDSKYASMDNCRREVNEAESMF
RHHGVPFISTTHKSIEEIASTIMHKAALGRKF

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=271, Percent_Identity=45.3874538745387, Blast_Score=247, Evalue=5e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3710_CHRVO (Q7NRS0)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_903380.1
- GeneID:   2547857
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_3710
- NMPDR:   fig|243365.1.peg.3710
- HOGENOM:   HBG304855
- OMA:   DAINYAM
- PhylomeDB:   Q7NRS0
- ProtClustDB:   PRK05339
- BioCyc:   CVIO243365:CV_3710-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30927; Mature: 30796

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHHRSAFFISDRTGITAESLGHTLLTQFDALDFQRETVPFVDTVEKARALAERISEIAE
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RDHLRPLVFTSIVNPEVREALRLNNVVLIDFFESFIGHLEIELGQKATLTVGKAHGMVNE
HHCCCHHHHHHHCCHHHHHHHHHCCEEEEHHHHHHHHHEEEECCCCEEEEEEHHCCCCCC
EKYDHRIEAVNFSLNHDDGVKLKDLHEADVILVGVSRSGKTPTCLYLALQYGIRAANYPL
HHHCCEEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCHHCCCCC
TPEDLGSPTLPKMLLPFKDKMFGLTIDPNRLHHIRSERRPDSKYASMDNCRREVNEAESM
CHHHCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FRHHGVPFISTTHKSIEEIASTIMHKAALGRKF
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SHHRSAFFISDRTGITAESLGHTLLTQFDALDFQRETVPFVDTVEKARALAERISEIAE
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RDHLRPLVFTSIVNPEVREALRLNNVVLIDFFESFIGHLEIELGQKATLTVGKAHGMVNE
HHCCCHHHHHHHCCHHHHHHHHHCCEEEEHHHHHHHHHEEEECCCCEEEEEEHHCCCCCC
EKYDHRIEAVNFSLNHDDGVKLKDLHEADVILVGVSRSGKTPTCLYLALQYGIRAANYPL
HHHCCEEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCHHCCCCC
TPEDLGSPTLPKMLLPFKDKMFGLTIDPNRLHHIRSERRPDSKYASMDNCRREVNEAESM
CHHHCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FRHHGVPFISTTHKSIEEIASTIMHKAALGRKF
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782