Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 34499147

GI number: 34499147

Start: 3991575

End: 3992822

Strand: Reverse

Name: dadA [H]

Synonym: CV_3692

Alternate gene names: 34499147

Gene position: 3992822-3991575 (Counterclockwise)

Preceding gene: 34499148

Following gene: 34499146

Centisome position: 84.04

GC content: 68.91

Gene sequence:

>1248_bases
ATGCGAGTGGCGGTTCTCGGGGCCGGCGTGGTGGGCGTGTCCACTGCCTGGTTCCTGGCCAGGATGGGGCATGAGGTGGT
GGTGCTGGAGCGCGCTTGCGGCGCCGCGCGGGAAACCAGCTTCGCCAATGGCGGCCAGCTGTCGGTCAGCCAGTCCGAGC
CCTGGGCCAATCCCGGCGCACCCTGGCAGGTGCTGCGCTGGCTGTGGCGCGACGACGCGCCGCTGCTGTTCCGGCCGCGG
CTGGACCCGGCGCAATGGCGCTGGATCGCCGGCTTTCTTGCCGAATGCCTGCCGGGCCGCCATCAGCGCAATACGCGTCA
GATGGTGGCGCTGGGCCTGTATAGCCGCGATGCGATGCGCCAGCTGCGCGAGGAGACCGGCATTTCCTACCGCCGTCTGT
CGCGCGGCATTCTCAGCCTGCATTACGATGCCTGCCAGTTGCGCCATGCCAGGCGTTCGGCTGCGCGGTTGCAGGCGCTG
GGCGTGGACAAGCGGGTGCTCACCCCGATGCAGGCGCTGGCGCTGGAGCCGGCGCTGGAGCCGGCCTTGCCCATGCTCAG
CGGTGCCAGCTGGTGCCCGGACGACGAGTCCGGCGATGTCCACCTGTTCACCCGCGGGCTGGCGGAAGCCGCCGCCGGTT
TGGGCGTGGAGTTCCGCTACAGTACGCGGATCAATGCGCTGGAAGCCGCGAGAGGCGAAGTGTCCGGGGTGTCGGTCACC
GGGCCGGACGGCAGCTACCAGCGCGTGACGGCGGACGCCTACGTATTGGCGCTGGGCAGCCATTCGCCGCTGTTGGCCGC
GCCGCTGGGCCTGCGCCTGCCGATTTACCCGGCCAAGGGCTATTCGGCGACGGCGCCGGTGAAGAGCCTGATCGCGGCTC
CCATGGTCAGCCTGACCGACGAATCCCACAAACTGGTGTTCAGCCGGCTGGGGGACGAATTGCGCATCGCAGGCACGGCC
GAACTGTCTGGTTACTCGTCCAGCCTCGATCCGAGGCGTTGCGAAGCCTTGCTGCGGCGAGCCAGGGCCTTGTTTCCCGC
CGCCTGCGATTGGGAGGCCGCGCGTTTCTGGAGCGGCCTGCGGCCGGCTACGCCGGGCAATGTGCCCTTGATAGGAAAAA
GCCGCGTCGGCCGCTTGTATCTGAATACAGGGCATGGCACGCTGGGCTGGACCGAGGGTGCCGGTTCGGGGCGCGCGTTG
GCGGAAATCATCAGCGGCAGGATGCCGCAGCTGGATTTCGCGTTCTGA

Upstream 100 bases:

>100_bases
TTGTCAGACAAAACAGTCGCCGCGCCGCGCGATTGCCATTACCATTCCACCTCTAACGGGCAAGCGAGTCTTGCCCGTTG
TCTTTCGTGTGGGGGATGGT

Downstream 100 bases:

>100_bases
GGGCGCTGAGGCGGCGGAATGCTTGATTTGCGGTTTTGACCGGCGCGTTTCGCGCCGGCGTCTGGAGTTTGAATGAGCGA
AGTGCAGGAAATGACGCCAT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRVAVLGAGVVGVSTAWFLARMGHEVVVLERACGAARETSFANGGQLSVSQSEPWANPGAPWQVLRWLWRDDAPLLFRPR
LDPAQWRWIAGFLAECLPGRHQRNTRQMVALGLYSRDAMRQLREETGISYRRLSRGILSLHYDACQLRHARRSAARLQAL
GVDKRVLTPMQALALEPALEPALPMLSGASWCPDDESGDVHLFTRGLAEAAAGLGVEFRYSTRINALEAARGEVSGVSVT
GPDGSYQRVTADAYVLALGSHSPLLAAPLGLRLPIYPAKGYSATAPVKSLIAAPMVSLTDESHKLVFSRLGDELRIAGTA
ELSGYSSSLDPRRCEALLRRARALFPAACDWEAARFWSGLRPATPGNVPLIGKSRVGRLYLNTGHGTLGWTEGAGSGRAL
AEIISGRMPQLDFAF

Sequences:

>Translated_415_residues
MRVAVLGAGVVGVSTAWFLARMGHEVVVLERACGAARETSFANGGQLSVSQSEPWANPGAPWQVLRWLWRDDAPLLFRPR
LDPAQWRWIAGFLAECLPGRHQRNTRQMVALGLYSRDAMRQLREETGISYRRLSRGILSLHYDACQLRHARRSAARLQAL
GVDKRVLTPMQALALEPALEPALPMLSGASWCPDDESGDVHLFTRGLAEAAAGLGVEFRYSTRINALEAARGEVSGVSVT
GPDGSYQRVTADAYVLALGSHSPLLAAPLGLRLPIYPAKGYSATAPVKSLIAAPMVSLTDESHKLVFSRLGDELRIAGTA
ELSGYSSSLDPRRCEALLRRARALFPAACDWEAARFWSGLRPATPGNVPLIGKSRVGRLYLNTGHGTLGWTEGAGSGRAL
AEIISGRMPQLDFAF
>Mature_415_residues
MRVAVLGAGVVGVSTAWFLARMGHEVVVLERACGAARETSFANGGQLSVSQSEPWANPGAPWQVLRWLWRDDAPLLFRPR
LDPAQWRWIAGFLAECLPGRHQRNTRQMVALGLYSRDAMRQLREETGISYRRLSRGILSLHYDACQLRHARRSAARLQAL
GVDKRVLTPMQALALEPALEPALPMLSGASWCPDDESGDVHLFTRGLAEAAAGLGVEFRYSTRINALEAARGEVSGVSVT
GPDGSYQRVTADAYVLALGSHSPLLAAPLGLRLPIYPAKGYSATAPVKSLIAAPMVSLTDESHKLVFSRLGDELRIAGTA
ELSGYSSSLDPRRCEALLRRARALFPAACDWEAARFWSGLRPATPGNVPLIGKSRVGRLYLNTGHGTLGWTEGAGSGRAL
AEIISGRMPQLDFAF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=413, Percent_Identity=39.7094430992736, Blast_Score=310, Evalue=9e-86,
Organism=Drosophila melanogaster, GI20130091, Length=430, Percent_Identity=25.3488372093023, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44945; Mature: 44945

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAVLGAGVVGVSTAWFLARMGHEVVVLERACGAARETSFANGGQLSVSQSEPWANPGA
CEEEEEECCHHHHHHHHHHHHCCCEEEEEEHHCCCHHHCCCCCCCEEEECCCCCCCCCCC
PWQVLRWLWRDDAPLLFRPRLDPAQWRWIAGFLAECLPGRHQRNTRQMVALGLYSRDAMR
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QLREETGISYRRLSRGILSLHYDACQLRHARRSAARLQALGVDKRVLTPMQALALEPALE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH
PALPMLSGASWCPDDESGDVHLFTRGLAEAAAGLGVEFRYSTRINALEAARGEVSGVSVT
HHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCCEEEE
GPDGSYQRVTADAYVLALGSHSPLLAAPLGLRLPIYPAKGYSATAPVKSLIAAPMVSLTD
CCCCCCEEEECCEEEEEECCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
ESHKLVFSRLGDELRIAGTAELSGYSSSLDPRRCEALLRRARALFPAACDWEAARFWSGL
CHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
RPATPGNVPLIGKSRVGRLYLNTGHGTLGWTEGAGSGRALAEIISGRMPQLDFAF
CCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRVAVLGAGVVGVSTAWFLARMGHEVVVLERACGAARETSFANGGQLSVSQSEPWANPGA
CEEEEEECCHHHHHHHHHHHHCCCEEEEEEHHCCCHHHCCCCCCCEEEECCCCCCCCCCC
PWQVLRWLWRDDAPLLFRPRLDPAQWRWIAGFLAECLPGRHQRNTRQMVALGLYSRDAMR
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QLREETGISYRRLSRGILSLHYDACQLRHARRSAARLQALGVDKRVLTPMQALALEPALE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH
PALPMLSGASWCPDDESGDVHLFTRGLAEAAAGLGVEFRYSTRINALEAARGEVSGVSVT
HHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCCEEEE
GPDGSYQRVTADAYVLALGSHSPLLAAPLGLRLPIYPAKGYSATAPVKSLIAAPMVSLTD
CCCCCCEEEECCEEEEEECCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
ESHKLVFSRLGDELRIAGTAELSGYSSSLDPRRCEALLRRARALFPAACDWEAARFWSGL
CHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
RPATPGNVPLIGKSRVGRLYLNTGHGTLGWTEGAGSGRALAEIISGRMPQLDFAF
CCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA