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The map label for this gene is yjbI [H]

Identifier: 34499146

GI number: 34499146

Start: 3991113

End: 3991502

Strand: Reverse

Name: yjbI [H]

Synonym: CV_3691

Alternate gene names: 34499146

Gene position: 3991502-3991113 (Counterclockwise)

Preceding gene: 34499147

Following gene: 34499145

Centisome position: 84.01

GC content: 62.05

Gene sequence:

>390_bases
ATGAGCGAAGTGCAGGAAATGACGCCATACCAGTTGCTGGGCGGCGAAGGCGTGGTGCGTTGGCTGACGGACCGGTTCTA
CGACATCATGGACAGCGAGCCTTCGGTGAAGCCGCTGCGCGACATGCATCCGGCGGATCTCGCCGGTTCGAGACAGAAGC
TGTTCATGTTCTTGTCCGGCTGGCTGGGCGGGCCGTCGCTGTATATGGAGGCGTTCGGCCATCCCCGGCTGCGGATGCGC
CACATGCCGTTCGCGGTCGACGAGGACGCGCGCGACCAGTGGATGTTCTGCATGCGTCGGGCCGTAAGCGAACTGGTGGT
GGAGGACTGGCTGAAGGACAAGCTTCTGGAGGCGTTCCACAACACCGCGGATTTCATGCGTAATCGTTGA

Upstream 100 bases:

>100_bases
GATGCCGCAGCTGGATTTCGCGTTCTGAGGGCGCTGAGGCGGCGGAATGCTTGATTTGCGGTTTTGACCGGCGCGTTTCG
CGCCGGCGTCTGGAGTTTGA

Downstream 100 bases:

>100_bases
CGCGATGGCGTATCGGCATGCCCATCCTATTGATCAGGAAATGATGGAGACTCTTGTAAATAGATGCTTGCAATCAGCCT
TGCTTTGTCCATGATTAAAG

Product: oxygen-binding protein

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSEVQEMTPYQLLGGEGVVRWLTDRFYDIMDSEPSVKPLRDMHPADLAGSRQKLFMFLSGWLGGPSLYMEAFGHPRLRMR
HMPFAVDEDARDQWMFCMRRAVSELVVEDWLKDKLLEAFHNTADFMRNR

Sequences:

>Translated_129_residues
MSEVQEMTPYQLLGGEGVVRWLTDRFYDIMDSEPSVKPLRDMHPADLAGSRQKLFMFLSGWLGGPSLYMEAFGHPRLRMR
HMPFAVDEDARDQWMFCMRRAVSELVVEDWLKDKLLEAFHNTADFMRNR
>Mature_128_residues
SEVQEMTPYQLLGGEGVVRWLTDRFYDIMDSEPSVKPLRDMHPADLAGSRQKLFMFLSGWLGGPSLYMEAFGHPRLRMRH
MPFAVDEDARDQWMFCMRRAVSELVVEDWLKDKLLEAFHNTADFMRNR

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15189; Mature: 15058

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS01213 GLOBIN_FAM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
8.5 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVQEMTPYQLLGGEGVVRWLTDRFYDIMDSEPSVKPLRDMHPADLAGSRQKLFMFLSG
CCCCHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
WLGGPSLYMEAFGHPRLRMRHMPFAVDEDARDQWMFCMRRAVSELVVEDWLKDKLLEAFH
HCCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTADFMRNR
HHHHHHCCC
>Mature Secondary Structure 
SEVQEMTPYQLLGGEGVVRWLTDRFYDIMDSEPSVKPLRDMHPADLAGSRQKLFMFLSG
CCCHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
WLGGPSLYMEAFGHPRLRMRHMPFAVDEDARDQWMFCMRRAVSELVVEDWLKDKLLEAFH
HCCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTADFMRNR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]