Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is ttuD [H]

Identifier: 34499115

GI number: 34499115

Start: 3959557

End: 3960819

Strand: Reverse

Name: ttuD [H]

Synonym: CV_3660

Alternate gene names: 34499115

Gene position: 3960819-3959557 (Counterclockwise)

Preceding gene: 34499118

Following gene: 34499114

Centisome position: 83.37

GC content: 72.05

Gene sequence:

>1263_bases
ATGTCCGATCTCGATCCGCAATCCACGCTCCGCCGCCTGTTCGCCGCCGCCGTCGCCAGCGCGATGCCGGAGCGGCTGGC
CGACCATCTGCCGCCGCCGCCTCGGGGCCGCACCGTGGTCGTCGGCGCCGGCAAGGCCGCCGCGGCGATGGCGCGGGCGC
TGGAGCAAGCCTGGCCGGGCGAGCTGTCCGGCGTGGTGGCGACGCGCTACGGCCACGCGGTGGCGACCGAACGGATAGAA
GTGCTGGAGGCGTCGCACCCGGTGCAGGACGAGGCGGGCTGCGCCGCCGCGCGGCGGATGCTGCAAGCGGTGAGCGGGCT
GACGGCGGATGATCTGGTGATCTGCCTGCTGTCCGGCGGCGGCTCCGCCTTGTTGGCTTTGCCGGCGCATGGCGTCAGCC
TGGAAGACAAGCAGGAGGTTAGCCGGCAGTTGCTGGCCTGCGGCGCCGGCATCGACGAGATGAACGCGCTGCGCAAGCAT
GTGTCCGCCATCAAGGGCGGGCGGCTGGCGCTGGCCTGCGCGCCGGCCAAGCTGGTGACGCTGGCGATTTCCGACGTGGT
GGGGGACGATCCGGCAGTCATCGCTTCCGGGCCGACGGCGGCGGATCCCAGCACCTATGCCGACGCGCGCGCCGTGGTCG
CCAAATATGGTTTGACCTTGCCGCGGGCAGTCACTGCGTTGCTGGCGGCGGAGCCGGACGAAACCCCCAAGCCGGGCGAT
GCCAGGCTGGCGCATGCCGAGTACCGGCTGATCGCGACGCCGCAGCTGGCTTTGCGGGCGGCCGCCACCGAGGCGGAGCG
GCTGGGCCTGAACGTGCTGCAGCTCGGCGACAGCATAGAGGGCGAGGCGCGCGAGGCGGCCAAGGTGCACGCCGGCATCG
CGCGGCAGATCGCCGCGCACGATTCGCCTGTGGCCAGGCCGGCGCTGATCCTGTCGGGCGGCGAAACCACGGTGACGCTG
CGGGGCAAGGGCAGAGGCGGGCGCAACAGCGAATTCCTGCTGGCGCTGGCCATCGCGCTGGACGGCCTGCCCGGCGTGTA
CGCGCTGGCGGCGGACACCGACGGCATTGACGGCAGCGAGGACAACGCCGGCGCGCTGATTTCGCCCGATACGCTGGCGC
GCGCGGCGGCGCTGGGCGTGAATGCCGGCGCGCGGCTGACCGACAATGACGGCTACGGCTTCTTCGCGGCGCTGGGCGAT
CTGCTGGTCACCGGCCCCACCCATACCAACGTCAACGATTTTCGCGCGATCCTGCTGCGGTAA

Upstream 100 bases:

>100_bases
GGCGGGGCGTTGGAATCGCCGCCATTCTAACGCGCGGCGGCGGGGGTGTCAGCCGCCGCCGGCTGCGGCAGAATGGCGTC
ATCGCCACCGGGGAAACGCC

Downstream 100 bases:

>100_bases
CGGAGTCGCGGCCAGCCGCGAGTCGGAACGCCGCCCGGCTCTCCACGATCCAGGCCATGCGATGCATGGCCTTTTTTGCG
CGCGCATTCATGACATGGAG

Product: hydroxypyruvate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSDLDPQSTLRRLFAAAVASAMPERLADHLPPPPRGRTVVVGAGKAAAAMARALEQAWPGELSGVVATRYGHAVATERIE
VLEASHPVQDEAGCAAARRMLQAVSGLTADDLVICLLSGGGSALLALPAHGVSLEDKQEVSRQLLACGAGIDEMNALRKH
VSAIKGGRLALACAPAKLVTLAISDVVGDDPAVIASGPTAADPSTYADARAVVAKYGLTLPRAVTALLAAEPDETPKPGD
ARLAHAEYRLIATPQLALRAAATEAERLGLNVLQLGDSIEGEAREAAKVHAGIARQIAAHDSPVARPALILSGGETTVTL
RGKGRGGRNSEFLLALAIALDGLPGVYALAADTDGIDGSEDNAGALISPDTLARAAALGVNAGARLTDNDGYGFFAALGD
LLVTGPTHTNVNDFRAILLR

Sequences:

>Translated_420_residues
MSDLDPQSTLRRLFAAAVASAMPERLADHLPPPPRGRTVVVGAGKAAAAMARALEQAWPGELSGVVATRYGHAVATERIE
VLEASHPVQDEAGCAAARRMLQAVSGLTADDLVICLLSGGGSALLALPAHGVSLEDKQEVSRQLLACGAGIDEMNALRKH
VSAIKGGRLALACAPAKLVTLAISDVVGDDPAVIASGPTAADPSTYADARAVVAKYGLTLPRAVTALLAAEPDETPKPGD
ARLAHAEYRLIATPQLALRAAATEAERLGLNVLQLGDSIEGEAREAAKVHAGIARQIAAHDSPVARPALILSGGETTVTL
RGKGRGGRNSEFLLALAIALDGLPGVYALAADTDGIDGSEDNAGALISPDTLARAAALGVNAGARLTDNDGYGFFAALGD
LLVTGPTHTNVNDFRAILLR
>Mature_419_residues
SDLDPQSTLRRLFAAAVASAMPERLADHLPPPPRGRTVVVGAGKAAAAMARALEQAWPGELSGVVATRYGHAVATERIEV
LEASHPVQDEAGCAAARRMLQAVSGLTADDLVICLLSGGGSALLALPAHGVSLEDKQEVSRQLLACGAGIDEMNALRKHV
SAIKGGRLALACAPAKLVTLAISDVVGDDPAVIASGPTAADPSTYADARAVVAKYGLTLPRAVTALLAAEPDETPKPGDA
RLAHAEYRLIATPQLALRAAATEAERLGLNVLQLGDSIEGEAREAAKVHAGIARQIAAHDSPVARPALILSGGETTVTLR
GKGRGGRNSEFLLALAIALDGLPGVYALAADTDGIDGSEDNAGALISPDTLARAAALGVNAGARLTDNDGYGFFAALGDL
LVTGPTHTNVNDFRAILLR

Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]

COG id: COG2379

COG function: function code G; Putative glycerate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543063, Length=485, Percent_Identity=34.8453608247423, Blast_Score=199, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI193205461, Length=415, Percent_Identity=31.3253012048193, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI19920578, Length=497, Percent_Identity=28.9738430583501, Blast_Score=141, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007835 [H]

Pfam domain/function: PF05161 MOFRL [H]

EC number: =1.1.1.81 [H]

Molecular weight: Translated: 42911; Mature: 42780

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLDPQSTLRRLFAAAVASAMPERLADHLPPPPRGRTVVVGAGKAAAAMARALEQAWPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCC
ELSGVVATRYGHAVATERIEVLEASHPVQDEAGCAAARRMLQAVSGLTADDLVICLLSGG
CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
GSALLALPAHGVSLEDKQEVSRQLLACGAGIDEMNALRKHVSAIKGGRLALACAPAKLVT
CCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
LAISDVVGDDPAVIASGPTAADPSTYADARAVVAKYGLTLPRAVTALLAAEPDETPKPGD
HHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
ARLAHAEYRLIATPQLALRAAATEAERLGLNVLQLGDSIEGEAREAAKVHAGIARQIAAH
CEEEECCEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHC
DSPVARPALILSGGETTVTLRGKGRGGRNSEFLLALAIALDGLPGVYALAADTDGIDGSE
CCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
DNAGALISPDTLARAAALGVNAGARLTDNDGYGFFAALGDLLVTGPTHTNVNDFRAILLR
CCCCCEECCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHEEECCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SDLDPQSTLRRLFAAAVASAMPERLADHLPPPPRGRTVVVGAGKAAAAMARALEQAWPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCC
ELSGVVATRYGHAVATERIEVLEASHPVQDEAGCAAARRMLQAVSGLTADDLVICLLSGG
CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
GSALLALPAHGVSLEDKQEVSRQLLACGAGIDEMNALRKHVSAIKGGRLALACAPAKLVT
CCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
LAISDVVGDDPAVIASGPTAADPSTYADARAVVAKYGLTLPRAVTALLAAEPDETPKPGD
HHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
ARLAHAEYRLIATPQLALRAAATEAERLGLNVLQLGDSIEGEAREAAKVHAGIARQIAAH
CEEEECCEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHC
DSPVARPALILSGGETTVTLRGKGRGGRNSEFLLALAIALDGLPGVYALAADTDGIDGSE
CCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
DNAGALISPDTLARAAALGVNAGARLTDNDGYGFFAALGDLLVTGPTHTNVNDFRAILLR
CCCCCEECCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHEEECCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]