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The map label for this gene is csoR [H]

Identifier: 34499097

GI number: 34499097

Start: 3939561

End: 3939884

Strand: Reverse

Name: csoR [H]

Synonym: CV_3642

Alternate gene names: 34499097

Gene position: 3939884-3939561 (Counterclockwise)

Preceding gene: 34499098

Following gene: 34499096

Centisome position: 82.93

GC content: 66.67

Gene sequence:

>324_bases
ATGGACGATACACATTCCAGCCAGGCGTGCTGTCATGAAGAGGCGCAGGCCGAGCGCAGCGTGGTGCAGCCGGGCAAGGC
CGCGTTGCTGAAGCGCCTGGCGCGGATCGAGGGCCAGGTCCGCGGCATCAGCGGCATGATAGAGTCCGACCGCTACTGCG
TGGACGTGCTGACCCAGGTGGCAGCGGTGAAGTCGGCGCTGGACGCGGTGGCGCTGCAGTTGCTGGAAAACCATATGAAG
GGCTGCGTCGCCCGCGCGCTGCAGCAGGGCGACGCGACCGGCATGGTCACCGAGCTGATCGACGTGGTGAAGAAGGTGCG
CTGA

Upstream 100 bases:

>100_bases
CCTGGAGCACGAGGACGCCGGGATGATGGGCACGCTGGATGTCCGTGCCTAGCGCGGACGGATGGGCGATAATGCCGATA
TGAAAAATCCGGGAACCGTC

Downstream 100 bases:

>100_bases
GCCGGCCGGTGTTTCAAGGAGCCTGTTGTCGCGGGCTTTTTTTCGGGGAGTTTGAGATGAAGAAACTGGCATGGATCGCG
CTGTTGTCCTCCGGCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDDTHSSQACCHEEAQAERSVVQPGKAALLKRLARIEGQVRGISGMIESDRYCVDVLTQVAAVKSALDAVALQLLENHMK
GCVARALQQGDATGMVTELIDVVKKVR

Sequences:

>Translated_107_residues
MDDTHSSQACCHEEAQAERSVVQPGKAALLKRLARIEGQVRGISGMIESDRYCVDVLTQVAAVKSALDAVALQLLENHMK
GCVARALQQGDATGMVTELIDVVKKVR
>Mature_107_residues
MDDTHSSQACCHEEAQAERSVVQPGKAALLKRLARIEGQVRGISGMIESDRYCVDVLTQVAAVKSALDAVALQLLENHMK
GCVARALQQGDATGMVTELIDVVKKVR

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 11532; Mature: 11532

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTHSSQACCHEEAQAERSVVQPGKAALLKRLARIEGQVRGISGMIESDRYCVDVLTQV
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AAVKSALDAVALQLLENHMKGCVARALQQGDATGMVTELIDVVKKVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDDTHSSQACCHEEAQAERSVVQPGKAALLKRLARIEGQVRGISGMIESDRYCVDVLTQV
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AAVKSALDAVALQLLENHMKGCVARALQQGDATGMVTELIDVVKKVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]